RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 OR4C12Q96R67 309 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 WFDC6Q9BQY6 131 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 RTBDNQ9BSG5 229 aaPredicted RBP4.53□□□□□ -1.68
CAPN3-211ENST00000562199 ATG5Q9H1Y0 275 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 ABRACLQ9P1F3 81 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 OBSL1O75147 1896 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 PIKFYVEQ9Y2I7 2098 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 KIAA1549LQ6ZVL6 1849 aa4.53□□□□□ -1.68
CAPN3-211ENST00000562199 TRAV1-2A0A0B4J238 106 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 A0A0B4J2A0 478 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 A0A1B0GV50 99 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 RBFOX3A6NFN3 312 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 FAM183AA6NL82 134 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SPRY3O43610 288 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 CXCL13O43927 109 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ADCYAP1P18509 176 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 CD70P32970 193 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SELENOPP49908 381 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF84P51523 738 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 GPM6AP51674 278 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 RPL18AQ02543 176 aaKnown RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 FOXF2Q12947 444 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 INSL4Q14641 139 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 HMGN3Q15651 99 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 UBE2V2Q15819 145 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 CEACAM16Q2WEN9 425 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 TCEAL5Q5H9L2 206 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SFRP4Q6FHJ7 346 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 PARM1Q6UWI2 310 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 IGFL2Q6UWQ7 119 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 HRCT1Q6UXD1 115 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 APOOLQ6UXV4 268 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 STAC2Q6ZMT1 411 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 C1QL2Q7Z5L3 287 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 DEFB132Q7Z7B7 95 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF429Q86V71 674 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 C17orf64Q86WR6 236 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 GAPTQ8N292 157 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SUMF2Q8NBJ7 301 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 OR2T33Q8NG76 320 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 OR2T35Q8NGX2 323 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM54Q969K7 222 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF689Q96CS4 500 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 DCTN5Q9BTE1 182 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM70Q9BUB7 260 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 APOOQ9BUR5 198 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 LRRC61Q9BV99 259 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 CHST6Q9GZX3 395 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ACKR4Q9NPB9 350 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 CA10Q9NS85 328 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SERTAD4Q9NUC0 356 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 RNF186Q9NXI6 227 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 KCNIP1Q9NZI2 227 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 SHPKQ9UHJ6 478 aa4.52□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF443Q9Y2A4 671 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 MRPS16Q9Y3D3 137 aaKnown RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 YTHDF2Q9Y5A9 579 aaKnown RBP4.52□□□□□ -1.69
CAPN3-211ENST00000562199 LOC107984640A0A0U1RRK4 108 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 FAM240AA0A1B0GVK7 77 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 OR2M5A3KFT3 312 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 C7orf71A4D174 169 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF850A8MQ14 1090 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 SNRPGP15A8MWD9 76 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 C2CD4DB7Z1M9 353 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 K7EQS6 105 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 PRYO14603 147 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 MRPS12O15235 138 aaKnown RBP4.51□□□□□ -1.69
CAPN3-211ENST00000562199 BCL2L11O43521 198 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 BUB3O43684 328 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 NDUFC2O95298 119 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 WNT1P04628 370 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 IL5P05113 134 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 GPX1P07203 203 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 SPINK8P0C7L1 97 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 CPMP14384 443 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 MYOD1P15172 320 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 CXCL2P19875 107 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 TPPP2P59282 170 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 UBE2NLQ5JXB2 153 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 UFSP1Q6NVU6 142 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 UNQ5815/PRO19632Q6UWF5 114 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM150AQ86TG1 271 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 SFTPA2Q8IWL1 248 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM183AQ8IXX5 376 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 Q8N1X5 172 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 SUMF1Q8NBK3 374 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 OR4F17Q8NGA8 305 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 OR5D16Q8NGK9 328 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 PSMF1Q92530 271 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 PNPLA2Q96AD5 504 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 OR4F4Q96R69 305 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 VAMP8Q9BV40 100 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 EHFQ9NZC4 300 aa4.51□□□□□ -1.69
CAPN3-211ENST00000562199 IER3IP1Q9Y5U9 82 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms