RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 MEIS3P1A6NDR6 274 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 FAM223BA6NKX1 122 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 TEX22C9J3V5 150 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 XRCC3O43542 346 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 TMEM127O75204 238 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 KBTBD11O94819 623 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 PPYP01298 95 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 CSN3P07498 182 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 IL6RP08887 468 aaPredicted RBP7.84□□□□□ -1.15
CLK3-205ENST00000561673 RPS19P39019 145 aaKnown RBP7.84□□□□□ -1.15
CLK3-205ENST00000561673 MSMO1Q15800 293 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 TATDN3Q17R31 274 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 RPEL1Q2QD12 228 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 TIMM50Q3ZCQ8 353 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 C19orf35Q6ZS72 473 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 FAM223AQ8IWN6 122 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 NECAP1Q8NC96 275 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 OR13F1Q8NGS4 319 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 VSTM2AQ8TAG5 236 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 TMEM167AQ8TBQ9 72 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 GIMAP1Q8WWP7 306 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 SORL1Q92673 2214 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 STAB2Q8WWQ8 2551 aa7.84□□□□□ -1.15
CLK3-205ENST00000561673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 BMPR1BO00238 502 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 SULT1C2O00338 296 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 AIREO43918 545 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 OR2J3O76001 311 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 HRASP01112 189 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 ZNF735P0CB33 412 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 MAS1LP35410 378 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 KIR2DS2P43631 304 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 CBX5P45973 191 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 FXYD4P59646 89 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 LSM3P62310 102 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 EXOSC2Q13868 293 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 C15orf32Q32M92 178 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 SSX9Q7RTT3 188 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 SLC25A42Q86VD7 318 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 CROCCP3Q8IVE0 287 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 ZBTB34Q8NCN2 500 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 TSPAN14Q8NG11 270 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 OR5AP2Q8NGF4 316 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 S100A16Q96FQ6 103 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 FYTTD1Q96QD9 318 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 SLC5A7Q9GZV3 580 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 SLC2A9Q9NRM0 540 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 SIGLEC8Q9NYZ4 499 aa7.83□□□□□ -1.16
CLK3-205ENST00000561673 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
CLK3-205ENST00000561673 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 TNCP24821 2201 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 A0A087WXM4 84 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 NPIPB5A8MRT5 1133 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 H0Y980 276 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 MYOD1P15172 320 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 AREGP15514 252 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 RPL27AP46776 148 aaKnown RBP7.82□□□□□ -1.16
CLK3-205ENST00000561673 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
CLK3-205ENST00000561673 MECP2P51608 486 aaKnown RBP7.82□□□□□ -1.16
CLK3-205ENST00000561673 RPL8P62917 257 aaKnown RBP7.82□□□□□ -1.16
CLK3-205ENST00000561673 TNP2Q05952 138 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 UBE2NLQ5JXB2 153 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 DHRS11Q6UWP2 260 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 ZNF818PQ6ZRF7 136 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 SPAG16Q8N0X2 631 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 RCHY1Q96PM5 261 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 FANCD2OSQ96PS1 177 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 C19orf73Q9NVV2 129 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 FBXL7Q9UJT9 491 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 ZNF257Q9Y2Q1 563 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 DMRT1Q9Y5R6 373 aa7.82□□□□□ -1.16
CLK3-205ENST00000561673 DPPA5A6NC42 116 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 IZUMO1RA6ND01 250 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 A8MZ25 164 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 PPP5D1E7EU14 171 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 RBFOX2O43251 390 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLK3-205ENST00000561673 NDUFB8O95169 186 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 TNFAIP8O95379 198 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
CLK3-205ENST00000561673 CRYGCP07315 174 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 HLA-GP17693 338 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 PSMB6P28072 239 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 GNRHRP30968 328 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 RFX2P48378 723 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 TAS2R31P59538 309 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 TAS2R20P59543 309 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 TMEM69Q5SWH9 247 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 OR4A47Q6IF82 309 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 ADAMTSL5Q6ZMM2 481 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 TMEM17Q86X19 198 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 SAMD12Q8N8I0 201 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 OR51H1Q8NH63 302 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 OR4A5Q8NH83 315 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 AIFM2Q9BRQ8 373 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 THAP7Q9BT49 309 aaPredicted RBP7.81□□□□□ -1.16
CLK3-205ENST00000561673 ZMAT4Q9H898 229 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 HRASLSQ9HDD0 168 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 VCX3AQ9NNX9 186 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms