RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PYHIN1Q6K0P9 492 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 MMD2Q8IY49 270 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 TCTEX1D1Q8N7M0 179 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 ZNF491Q8N8L2 437 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 MINDY2Q8NBR6 621 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 OR5M8Q8NGP6 311 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 OR1N2Q8NGR9 330 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 VSTM2AQ8TAG5 236 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 SRSF12Q8WXF0 261 aaKnown RBP7.89□□□□□ -1.15
HERC1-212ENST00000561348 OR2A7Q96R45 310 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 HINT2Q9BX68 163 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 SLIRPQ9GZT3 109 aaKnown RBP7.89□□□□□ -1.15
HERC1-212ENST00000561348 MTFP1Q9UDX5 166 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 ANAPC10Q9UM13 185 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 NOTCH3Q9UM47 2321 aa7.89□□□□□ -1.15
HERC1-212ENST00000561348 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 GABARAPH6UMI1 98 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 KBTBD11O94819 623 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 HPRT1P00492 218 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 KRASP01116 189 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 IGLV1-40P01703 118 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 BRWD1-AS2P59051 145 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 EIF4EBP1Q13541 118 aaPredicted RBP7.88□□□□□ -1.15
HERC1-212ENST00000561348 OR4A47Q6IF82 309 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 STEAP1BQ6NZ63 245 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 ETV3LQ6ZN32 361 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 TBC1D26Q86UD7 250 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 OR4D10Q8NGI6 311 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 C4orf3Q8WVX3 66 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 UBE2E2Q96LR5 201 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 AIFM2Q9BRQ8 373 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 MCUBQ9NWR8 336 aa7.88□□□□□ -1.15
HERC1-212ENST00000561348 TRAV3A0A0B4J244 114 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 DISC1C4P0D8 188 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 RBMXL2O75526 392 aaKnown RBP7.87□□□□□ -1.15
HERC1-212ENST00000561348 REG1AP05451 166 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 NQO2P16083 231 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 F2RP25116 425 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 G6PCP35575 357 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
HERC1-212ENST00000561348 RPL8P62917 257 aaKnown RBP7.87□□□□□ -1.15
HERC1-212ENST00000561348 SSBP2P81877 361 aaPredicted RBP7.87□□□□□ -1.15
HERC1-212ENST00000561348 SLC38A6Q8IZM9 456 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 TMEM229BQ8NBD8 167 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 CD300LFQ8TDQ1 290 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 DGCR14Q96DF8 476 aaKnown RBP7.87□□□□□ -1.15
HERC1-212ENST00000561348 SPIN2AQ99865 258 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 SPIN2BQ9BPZ2 258 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 COMMD5Q9GZQ3 224 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 TMEM140Q9NV12 185 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 COPZ2Q9P299 210 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 NSG2Q9Y328 171 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 NOTCH1P46531 2555 aa7.87□□□□□ -1.15
HERC1-212ENST00000561348 SNAPC5O75971 98 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 OR9G9P0C7N8 305 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 AKAIN1P0CW23 69 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 DEFA4P12838 97 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 HLA-GP17693 338 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 SLC6A1P30531 599 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 SLURP1P55000 103 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 TAS2R31P59538 309 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 MRPS10P82664 201 aaKnown RBP7.86□□□□□ -1.15
HERC1-212ENST00000561348 ZNF616Q08AN1 781 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 MSMO1Q15800 293 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 MRGPRG-AS1Q2M3A8 158 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 ASPHD1Q5U4P2 390 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 FOXB2Q5VYV0 432 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 C19orf35Q6ZS72 473 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 RNF152Q8N8N0 203 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 RNASE11Q8TAA1 199 aaKnown RBP7.86□□□□□ -1.15
HERC1-212ENST00000561348 TMEM167AQ8TBQ9 72 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 MARCH1Q8TCQ1 289 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 SMIM4Q8WVI0 70 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 RCC1LQ96I51 464 aaKnown RBP7.86□□□□□ -1.15
HERC1-212ENST00000561348 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 SLA2Q9H6Q3 261 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 NDUFA13Q9P0J0 144 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 C14orf166Q9Y224 244 aaKnown RBP7.86□□□□□ -1.15
HERC1-212ENST00000561348 S4R3C0 116 aa7.86□□□□□ -1.15
HERC1-212ENST00000561348 TNCP24821 2201 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 IGHV4OR15-8A0A075B7B6 117 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 A0A087WW49 117 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 TEX13DA0A0J9YY54 714 aaPredicted RBP7.85□□□□□ -1.15
HERC1-212ENST00000561348 MARCH11A6NNE9 402 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 SEC14L6B5MCN3 397 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 LINC01619G3V211 115 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 OR2J3O76001 311 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 IGHV3-23P01764 117 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 SERPINE2P07093 398 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 OR8U8P0C7N1 319 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 TBPP20226 339 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 INPP1P49441 399 aa7.85□□□□□ -1.15
HERC1-212ENST00000561348 MECP2P51608 486 aaKnown RBP7.85□□□□□ -1.15
HERC1-212ENST00000561348 CRIP2P52943 208 aaPredicted RBP7.85□□□□□ -1.15
HERC1-212ENST00000561348 PIGPP57054 158 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms