RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 NSG2Q9Y328 171 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 IGHV3-72A0A0B4J1Y9 119 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 IGHV1-69DA0A0B4J2H0 117 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 C15orf61A6NNL5 157 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 TIMM23O14925 209 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 NPFFO15130 113 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 KCNAB3O43448 404 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 OR2F2O95006 317 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 AVPP01185 164 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 IGHV1-69P01742 117 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 SAA1P0DJI8 122 aaPredicted RBP9.07□□□□□ -0.96
SNX1-212ENST00000560861 P2RY1P47900 373 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 LGALS7P47929 136 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 TNFRSF9Q07011 255 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 OR2F1Q13607 317 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 EBI3Q14213 229 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 FBLN7Q53RD9 439 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 KLF17Q5JT82 389 aaPredicted RBP9.07□□□□□ -0.96
SNX1-212ENST00000560861 TMUB2Q71RG4 321 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 Q8N6K4 173 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 WFDC11Q8NEX6 87 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 OR4C13Q8NGP0 309 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 OR52E5Q8NH55 327 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 DCUN1D4Q92564 292 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 HARBI1Q96MB7 349 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 RNF5Q99942 180 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 QTRT1Q9BXR0 403 aaKnown RBP9.07□□□□□ -0.96
SNX1-212ENST00000560861 MS4A7Q9GZW8 240 aaPredicted RBP9.07□□□□□ -0.96
SNX1-212ENST00000560861 MAGT1Q9H0U3 335 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 TMEM14BQ9NUH8 114 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 FOXA2Q9Y261 457 aaPredicted RBP9.07□□□□□ -0.96
SNX1-212ENST00000560861 AUP1Q9Y679 476 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 TLN2Q9Y4G6 2542 aa9.07□□□□□ -0.96
SNX1-212ENST00000560861 NAV3Q8IVL0 2385 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 H7C2Y5 167 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 J3QLI3 93 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 L7N2F9 121 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 SHOXO15266 292 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 SYNGR2O43760 224 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 CHST1O43916 411 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 KBTBD11O94819 623 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 NXPH3O95157 252 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 FSHBP01225 129 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 RLN2P04090 185 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 FGF2P09038 288 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 SAA4P35542 130 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 UBE2KP61086 200 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 OPCMLQ14982 345 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 THNSL2Q86YJ6 484 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 MAPK1IP1LQ8NDC0 245 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 OR4A5Q8NH83 315 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 MALSU1Q96EH3 234 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 SMIM8Q96KF7 97 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 AIFM2Q9BRQ8 373 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 RBKSQ9H477 322 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 HILPDAQ9Y5L2 63 aa9.06□□□□□ -0.96
SNX1-212ENST00000560861 ZNF469Q96JG9 3925 aaPredicted RBP9.06□□□□□ -0.96
SNX1-212ENST00000560861 A0A0D9SG52 128 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 IGSF23A1L1A6 192 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 SSSCA1O60232 199 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 PAX6P26367 422 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 CNTFRP26992 372 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 RPL12P30050 165 aaKnown RBP9.05□□□□□ -0.96
SNX1-212ENST00000560861 S100A11P31949 105 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
SNX1-212ENST00000560861 TAS2R30P59541 319 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 OR2B8PP59922 312 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 RPS16P62249 146 aaKnown RBP9.05□□□□□ -0.96
SNX1-212ENST00000560861 PSG5Q15238 335 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 SSX2Q16385 188 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 RUSC1-AS1Q66K80 236 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 CCDC144NLQ6NUI1 221 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
SNX1-212ENST00000560861 RAB40CQ96S21 281 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 LYRM2Q9NU23 88 aaPredicted RBP9.05□□□□□ -0.96
SNX1-212ENST00000560861 ZNF257Q9Y2Q1 563 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 ACANP16112 2415 aa9.05□□□□□ -0.96
SNX1-212ENST00000560861 VPS13CQ709C8 3753 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 TRAV40A0A0B4J280 105 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 BCL2L11O43521 198 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 GPR137BO60478 399 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 TSC22D2O75157 780 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 MED6O75586 246 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 NDUFA3O95167 84 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 SPDEFO95238 335 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 MYOD1P15172 320 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 LGALS4P56470 323 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 SPCS3P61009 180 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
SNX1-212ENST00000560861 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
SNX1-212ENST00000560861 NPBQ8NG41 125 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms