RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 KCNJ3P48549 501 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 SLC22A6Q4U2R8 563 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 ACTBL2Q562R1 376 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 LAMTOR1Q6IAA8 161 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 IDO2Q6ZQW0 420 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 C9orf62Q8N4C0 152 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 FAM89BQ8N5H3 189 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 SUMF2Q8NBJ7 301 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 OR10K1Q8NGX5 313 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 S100A13Q99584 98 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 PRRT1Q99946 306 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 ELOVL1Q9BW60 279 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 TM2D1Q9BX74 207 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 BANF2Q9H503 90 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 DNAH17Q9UFH2 4485 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 DNAH11Q96DT5 4516 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 A0A1W2PP11 408 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 TMEM30CPA0ZSE6 113 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 NBR2O15453 112 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 SOCS1O15524 211 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 CA11O75493 328 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 NDUFA3O95167 84 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 RAP2BP61225 183 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 Q3ZCU0 254 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 Q5BKY6 102 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 PLAC9Q5JTB6 97 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
TPM1-225ENST00000560679 GATAD1Q8WUU5 269 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 FLYWCH2Q96CP2 140 aaKnown RBP7.52□□□□□ -1.21
TPM1-225ENST00000560679 RHOVQ96L33 236 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 MRPL20Q9BYC9 149 aaKnown RBP7.52□□□□□ -1.21
TPM1-225ENST00000560679 METTL9Q9H1A3 318 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 KCNK7Q9Y2U2 307 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 HSPB11Q9Y547 144 aa7.52□□□□□ -1.21
TPM1-225ENST00000560679 DEDDO75618 318 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 GSTT2P0CG29 244 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 GZMHP20718 246 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 SERPINA2P20848 420 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 TMEM50BP56557 158 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 TPPP2P59282 170 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 ASCL4Q6XD76 172 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 GTSCR1Q86UQ5 136 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 ODF3L1Q8IXM7 274 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 GVQW1Q8N7I0 195 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 TCTEX1D1Q8N7M0 179 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 PXT1Q8NFP0 134 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 NPBQ8NG41 125 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 OR10V1Q8NGI7 309 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 OR52B4Q8NGK2 314 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 OR9G4Q8NGQ1 327 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 OR13C8Q8NGS7 320 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 OR2T35Q8NGX2 323 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 ARHGAP5-AS1Q96IT6 56 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 Q96M66 194 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 MS4A10Q96PG2 267 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 ZNF251Q9BRH9 671 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 ST6GALNAC5Q9BVH7 336 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 PECRQ9BY49 303 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 WFDC10AQ9H1F0 79 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 IFT22Q9H7X7 185 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 PIPOXQ9P0Z9 390 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 MGAT4AQ9UM21 535 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 GAB2Q9UQC2 676 aa7.51□□□□□ -1.21
TPM1-225ENST00000560679 G3V3Q6 166 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 H0Y980 276 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 ZNF780AO75290 641 aaPredicted RBP7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR7C1O76099 320 aaPredicted RBP7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR2A4O95047 310 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 CSN3P07498 182 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR4E1P0C645 316 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 HRH1P35367 487 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 RBM11P57052 281 aaKnown RBP7.5□□□□□ -1.21
TPM1-225ENST00000560679 CX3CL1P78423 397 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 EWSR1Q01844 656 aaKnown RBP eCLIP7.5□□□□□ -1.21
TPM1-225ENST00000560679 DHODHQ02127 395 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 ARFRP1Q13795 201 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
TPM1-225ENST00000560679 GNMTQ14749 295 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 RSU1Q15404 277 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 SCGB2B2Q4G0G5 96 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 C4orf46Q504U0 113 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 LIN54Q6MZP7 749 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 ZNF497Q6ZNH5 498 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 HOGA1Q86XE5 327 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR2AK2Q8NG84 335 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR11H4Q8NGC9 324 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR4K15Q8NH41 348 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 OR1L1Q8NH94 360 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 GRPEL2Q8TAA5 225 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 ASB13Q8WXK3 278 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 SNAPC3Q92966 411 aa7.5□□□□□ -1.21
TPM1-225ENST00000560679 CYYR1Q96J86 154 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms