RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 VAX1Q5SQQ9 334 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 VKORC1L1Q8N0U8 176 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 SPAG16Q8N0X2 631 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 DYNC2LI1Q8TCX1 351 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 RAB2BQ8WUD1 216 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 DCUN1D4Q92564 292 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 DPF1Q92782 380 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 USMG5Q96IX5 58 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 OR5B12Q96R08 314 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 SPIN2AQ99865 258 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 SPIN2BQ9BPZ2 258 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 PLEKHA2Q9HB19 425 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 DNAH9Q9NYC9 4486 aa10.18□□□□□ -0.78
SMAD3-213ENST00000560175 IGHV4OR15-8A0A075B7B6 117 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 A0A087WW49 117 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 A0A1B0GW64 132 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 WI2-2373I1.2A0A1W2PRP0 233 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 HLA-DMAP28067 261 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 HERV-K104P61576 105 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF343Q6P1L6 599 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 SNX29P2Q8IUI4 249 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 C15orf40Q8WUR7 153 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 DLX4Q92988 240 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-213ENST00000560175 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 FAM212BQ9NTI7 297 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-213ENST00000560175 MTFP1Q9UDX5 166 aa10.17□□□□□ -0.78
SMAD3-213ENST00000560175 CGB1A6NKQ9 187 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 SEC14L6B5MCN3 397 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 CTDSP2O14595 271 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 OVOL1O14753 267 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 ACTL6BO94805 426 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 IGHV3-11P01762 117 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 CRYGCP07315 174 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 NQO2P16083 231 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 F2RP25116 425 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 RAB25P57735 213 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 DGCR2P98153 550 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF45Q02386 682 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF585BQ52M93 769 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 AADACL3Q5VUY0 350 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 OR4A47Q6IF82 309 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 LPCAT3Q6P1A2 487 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 ACSM6Q6P461 480 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 LHFPL1Q86WI0 220 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 TMEM17Q86X19 198 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 CLVS1Q8IUQ0 354 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-213ENST00000560175 RSRP1Q9BUV0 290 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 RANGRFQ9HD47 186 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-213ENST00000560175 SLC2A9Q9NRM0 540 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 COMMD9Q9P000 198 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 EXTL2Q9UBQ6 330 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 KLK11Q9UBX7 282 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 COL7A1Q02388 2944 aa10.16□□□□□ -0.78
SMAD3-213ENST00000560175 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 FAM25AB3EWG3 89 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 FAM25CB3EWG5 89 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 FAM25GB3EWG6 89 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 GPR31O00270 319 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 UPK2O00526 184 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 TBPP20226 339 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.785e-8■■■□□ 16.9
SMAD3-213ENST00000560175 RPL27AP46776 148 aaKnown RBP10.15□□□□□ -0.78
SMAD3-213ENST00000560175 SLURP1P55000 103 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 RPL8P62917 257 aaKnown RBP10.15□□□□□ -0.78
SMAD3-213ENST00000560175 KLF5Q13887 457 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-213ENST00000560175 C10orf55Q5SWW7 151 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF429Q86V71 674 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 CMTM1Q8IZ96 169 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 OR52I2Q8NH67 350 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 DGCR14Q96DF8 476 aaKnown RBP10.15□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF355PQ9NSJ1 428 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 CCDC59Q9P031 241 aaKnown RBP10.15□□□□□ -0.78
SMAD3-213ENST00000560175 ZNF257Q9Y2Q1 563 aa10.15□□□□□ -0.78
SMAD3-213ENST00000560175 C13orf42A0A1B0GVH6 325 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 FAM223BA6NKX1 122 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 GABARAPH6UMI1 98 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 CTDSPLO15194 276 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 CD74P04233 296 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 APELAP0DMC3 54 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 CTRB1P17538 263 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 HLA-GP17693 338 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 MRPS10P82664 201 aaKnown RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 CTRB2Q6GPI1 263 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 FAM223AQ8IWN6 122 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 LAX1Q8IWV1 398 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 FANCD2OSQ96PS1 177 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 PHB2Q99623 299 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 SOSTQ9BQB4 213 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 SLIRPQ9GZT3 109 aaKnown RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 NXF2Q9GZY0 626 aaKnown RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 AKIP1Q9NQ31 210 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 COA4Q9NYJ1 87 aa10.14□□□□□ -0.79
SMAD3-213ENST00000560175 RABL2AQ9UBK7 228 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-213ENST00000560175 RABL2BQ9UNT1 228 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms