RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 NSD1Q96L73 2696 aaPredicted RBP7.44□□□□□ -1.22
HERC1-206ENST00000559996 DUXBA0A1W2PPF3 345 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 UPK2O00526 184 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 CCSO14618 274 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 RRHO14718 337 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SLC25A17O43808 307 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 OR2F2O95006 317 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 HRASP01112 189 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 HOXB5P09067 269 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SULT1A3P0DMM9 295 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SULT1A4P0DMN0 295 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 EGR2P11161 476 aaPredicted RBP7.44□□□□□ -1.22
HERC1-206ENST00000559996 ANXA3P12429 323 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 MYOD1P15172 320 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 TMEM11P17152 192 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 HNF1AP20823 631 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 VDAC1P21796 283 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 H2BFSP57053 126 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SRSF4Q08170 494 aaKnown RBP7.44□□□□□ -1.22
HERC1-206ENST00000559996 FCN2Q15485 313 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 AARDQ4LEZ3 155 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 C11orf88Q6PI97 169 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SSX9Q7RTT3 188 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 ZNF695Q8IW36 515 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 C5orf56Q8N8D9 126 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 TMEM167AQ8TBQ9 72 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 PHB2Q99623 299 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 CHIAQ9BZP6 476 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 FBXL15Q9H469 300 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 GPN1Q9HCN4 374 aaPredicted RBP7.44□□□□□ -1.22
HERC1-206ENST00000559996 RAB18Q9NP72 206 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 TMEM140Q9NV12 185 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 NSG2Q9Y328 171 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 MMP24Q9Y5R2 645 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 POMT1Q9Y6A1 747 aa7.44□□□□□ -1.22
HERC1-206ENST00000559996 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
HERC1-206ENST00000559996 NBR2O15453 112 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 KBTBD11O94819 623 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 OR2A4O95047 310 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 SIX6O95475 246 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 FAM157CP0CG43 387 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 HILS1P60008 231 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 RRAS2P62070 204 aaPredicted RBP7.43□□□□□ -1.22
HERC1-206ENST00000559996 BLCAPP62952 87 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 HES1Q14469 280 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 C5orf64Q2M2E5 130 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 TMEM86BQ8N661 226 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 SSMEM1Q8WWF3 244 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 DUX5Q96PT3 197 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 OR2A7Q96R45 310 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 SLC25A33Q9BSK2 321 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 TMED3Q9Y3Q3 217 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 MAST4O15021 2626 aa7.43□□□□□ -1.22
HERC1-206ENST00000559996 IGHV7-81A0A0B4J1V7 117 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 A0A1B0GU03 582 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 DNAJC9-AS1A6NH13 148 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 HMX3A6NHT5 357 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 CLDN34H7C241 214 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 FGF16O43320 207 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 SPDEFO95238 335 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 SLC25A6P12236 298 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 ARHGDIBP52566 201 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 SRPXP78539 464 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 MMDQ15546 238 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 PRSS8Q16651 343 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 PPP1R27Q86WC6 154 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 FAM219AQ8IW50 185 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 Q8N3U1 123 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 UXS1Q8NBZ7 420 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 OR8H1Q8NGG4 311 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 OR4D5Q8NGN0 318 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 OR5M8Q8NGP6 311 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 OR5R1Q8NH85 324 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
HERC1-206ENST00000559996 TSNAXQ99598 290 aaKnown RBP7.42□□□□□ -1.22
HERC1-206ENST00000559996 HSPB9Q9BQS6 159 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
HERC1-206ENST00000559996 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 TMEM14BQ9NUH8 114 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 COA4Q9NYJ1 87 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 METTL1Q9UBP6 276 aaKnown RBP7.42□□□□□ -1.22
HERC1-206ENST00000559996 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 FBXO7Q9Y3I1 522 aa7.42□□□□□ -1.22
HERC1-206ENST00000559996 TEX50A0A1B0GTY4 177 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 NCBP2LA6PVI3 153 aaKnown RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 G3V3Q6 166 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 FGF2P09038 288 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 BCAP31P51572 246 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 CX3CL1P78423 397 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 NDPQ00604 133 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 ID3Q02535 119 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 VMA21Q3ZAQ7 101 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 PDLIM3Q53GG5 364 aaPredicted RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 Q5BKY6 102 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 C11orf87Q6NUJ2 197 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 ZNF562Q6V9R5 426 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms