RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ZNF773Q6PK81 442 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 LAX1Q8IWV1 398 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 Q8N1Y9 231 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 CD300LFQ8TDQ1 290 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 IFT46Q9NQC8 304 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 C19orf73Q9NVV2 129 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 TECRQ9NZ01 308 aaKnown RBP9.59□□□□□ -0.87
SNX1-209ENST00000559961 THYN1Q9P016 225 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 SORL1Q92673 2214 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 ZNF320A2RRD8 509 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 NPIPB5A8MRT5 1133 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 TRBV12-3P01733 135 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 HERV-K104P61576 105 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 ERVK-16P61578 105 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 MSMO1Q15800 293 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 SSX9Q7RTT3 188 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 SLC16A13Q7RTY0 426 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 NR2C2APQ86WQ0 139 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 VKORC1L1Q8N0U8 176 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 SPAG16Q8N0X2 631 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 TMEM167AQ8TBQ9 72 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 S100A16Q96FQ6 103 aaKnown RBP9.58□□□□□ -0.88
SNX1-209ENST00000559961 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 COMMD5Q9GZQ3 224 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 SLC5A7Q9GZV3 580 aa9.58□□□□□ -0.88
SNX1-209ENST00000559961 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 HMX3A6NHT5 357 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 BMPR1BO00238 502 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 TNFSF12O43508 249 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 HLA-GP17693 338 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 S100GP29377 79 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 ARL3P36405 182 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 FXYD4P59646 89 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
SNX1-209ENST00000559961 NEDD8Q15843 81 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 HAGHQ16775 308 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 IL34Q6ZMJ4 242 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 HOGA1Q86XE5 327 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 DMBX1Q8NFW5 382 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 TSPAN14Q8NG11 270 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 OR13F1Q8NGS4 319 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 NEURL2Q9BR09 285 aa9.57□□□□□ -0.88
SNX1-209ENST00000559961 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 OR2C1O95371 312 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 HPRT1P00492 218 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 PPYP01298 95 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 ZNF735P0CB33 412 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 NQO2P16083 231 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 PSMB6P28072 239 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 TAS2R31P59538 309 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 ZNF45Q02386 682 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 MRGPRG-AS1Q2M3A8 158 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
SNX1-209ENST00000559961 C10orf55Q5SWW7 151 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 AADACL3Q5VUY0 350 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 GPHB5Q86YW7 130 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 PUSL1Q8N0Z8 303 aaKnown RBP9.56□□□□□ -0.88
SNX1-209ENST00000559961 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 BET1LQ9NYM9 111 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 ADAM30Q9UKF2 790 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 CEPT1Q9Y6K0 416 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 TENM3Q9P273 2699 aa9.56□□□□□ -0.88
SNX1-209ENST00000559961 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 LGALS9O00182 355 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 SULT1C2O00338 296 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNX1-209ENST00000559961 SSX5O60225 188 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 FOLR2P14207 255 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 CLEC19AQ6UXS0 136 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
SNX1-209ENST00000559961 CMTM1Q8IZ96 169 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 OR5AP2Q8NGF4 316 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 GIMAP1Q8WWP7 306 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 AUNIPQ9H7T9 357 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 PLEKHA3Q9HB20 300 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 COL7A1Q02388 2944 aa9.55□□□□□ -0.88
SNX1-209ENST00000559961 SMIM31A0A1B0GVY4 71 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 C2orf70A6NJV1 201 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 OR11H12B2RN74 326 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 TEX22C9J3V5 150 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 SNAPC5O75971 98 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 IGLV2-14P01704 120 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 CRYGCP07315 174 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 IL6RP08887 468 aaPredicted RBP9.54□□□□□ -0.88
SNX1-209ENST00000559961 CLEC2LP0C7M8 214 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 ZNF57Q68EA5 555 aaPredicted RBP9.54□□□□□ -0.88
SNX1-209ENST00000559961 THOC7Q6I9Y2 204 aaKnown RBP9.54□□□□□ -0.88
SNX1-209ENST00000559961 HSD17B13Q7Z5P4 300 aaPredicted RBP9.54□□□□□ -0.88
SNX1-209ENST00000559961 TMEM17Q86X19 198 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms