RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 HYLS1Q96M11 299 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 RNF126Q9BV68 326 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 ZFP57Q9NU63 452 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 NSG2Q9Y328 171 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 FAM96BQ9Y3D0 163 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
HERC1-205ENST00000559886 POMT1Q9Y6A1 747 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FAM90A26D6RGX4 464 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 H0YIZ8 118 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 K7EPK0 472 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 UPK2O00526 184 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 KBTBD11O94819 623 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FBP1P09467 338 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 CNTFRP26992 372 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 S100A10P60903 97 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 VMA21Q3ZAQ7 101 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FBLN7Q53RD9 439 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FOXRED2Q8IWF2 684 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FAM71E2Q8N5Q1 922 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 Q8N6K4 173 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 OR4A5Q8NH83 315 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 ZFHX3Q15911 3703 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 SLC25A17O43808 307 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 RBMXL2O75526 392 aaKnown RBP9.76□□□□□ -0.85
HERC1-205ENST00000559886 SNAPC5O75971 98 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FAM106CPP0CH98 169 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 PET100P0DJ07 73 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 SLC25A4P12235 298 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 HES1Q14469 280 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 PSG5Q15238 335 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 ZNF429Q86V71 674 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 TEX45Q8NA69 505 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 THAP6Q8TBB0 222 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 TMEM14BQ9NUH8 114 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
HERC1-205ENST00000559886 DEDDO75618 318 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 NXPH3O95157 252 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 SPDEFO95238 335 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 CRYGBP07316 175 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 LYL1P12980 280 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 OR2B8PP59922 312 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 POLR2GP62487 172 aaKnown RBP eCLIP9.75□□□□□ -0.85
HERC1-205ENST00000559886 TNFRSF9Q07011 255 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 HNF4GQ14541 408 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 PRSS54Q6PEW0 395 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 C9orf139Q6ZV77 190 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 NPBQ8NG41 125 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 QTRT1Q9BXR0 403 aaKnown RBP9.75□□□□□ -0.85
HERC1-205ENST00000559886 OR5AC2Q9NZP5 309 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 MBD2Q9UBB5 411 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 FOXA2Q9Y261 457 aaPredicted RBP9.75□□□□□ -0.85
HERC1-205ENST00000559886 RCL1Q9Y2P8 373 aaKnown RBP9.75□□□□□ -0.85
HERC1-205ENST00000559886 LSM5Q9Y4Y9 91 aaKnown RBP9.75□□□□□ -0.85
HERC1-205ENST00000559886 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 RLN2P04090 185 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 FGF2P09038 288 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
HERC1-205ENST00000559886 F2RL1P55085 397 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 SPNS3Q6ZMD2 512 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 CACFD1Q9UGQ2 172 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 PRNDQ9UKY0 176 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
HERC1-205ENST00000559886 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 NBR2O15453 112 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 NDUFA3O95167 84 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 TMEM11P17152 192 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 MMDQ15546 238 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 AANATQ16613 207 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 MRGPRG-AS1Q2M3A8 158 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 PDLIM3Q53GG5 364 aaPredicted RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 BCL6BQ8N143 479 aaPredicted RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 OR52E5Q8NH55 327 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 PIFOQ8TCI5 191 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 C11orf1Q9H5F2 150 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 PLSCR3Q9NRY6 295 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 FXYD6-FXYD2A0A087WZ82 144 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 RRHO14718 337 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 SYNGR2O43760 224 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 LRRC75BQ2VPJ9 315 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 SSX3Q99909 188 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 FKBP11Q9NYL4 201 aa9.74□□□□□ -0.85
HERC1-205ENST00000559886 METTL1Q9UBP6 276 aaKnown RBP9.74□□□□□ -0.85
HERC1-205ENST00000559886 WRBO00258 174 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 CHST1O43916 411 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 SSSCA1O60232 199 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 MED6O75586 246 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 SPCS3P61009 180 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 ZNF546Q86UE3 836 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms