RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMEM204Q9BSN7 226 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 SAA2-SAA4A0A096LPE2 208 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 H7BYZ3 331 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 SOX15O60248 233 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 SAA2P0DJI9 122 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TCF23Q7RTU1 214 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 OR4X1Q8NH49 305 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 DDB2Q92466 427 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 CCL13Q99616 98 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 DERL1Q9BUN8 251 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TCF19Q9Y242 345 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TRAV20A0A0B4J274 112 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 SEC14L6B5MCN3 397 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 MMP23AO75900 390 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 CGB3P0DN86 165 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 CGB7P0DN87 165 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 CFHR2P36980 270 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 HCFC1P51610 2035 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 GNB1P62873 340 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 AARDQ4LEZ3 155 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 C1orf185Q5T7R7 199 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 CST9LP1Q5W188 147 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 FAM216BQ8N7L0 139 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 SSMEM1Q8WWF3 244 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 C1orf159Q96HA4 380 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 PCGF1Q9BSM1 259 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 TET2Q6N021 2002 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-216ENST00000559819 PGPEP1LA6NFU8 196 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 IGHV2-70P01814 119 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 FABP4P15090 132 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 CHRNA7P36544 502 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 LYG1Q8N1E2 194 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 ZNF383Q8NA42 475 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 OR10A7Q8NGE5 316 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 DIRC2Q96SL1 478 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 GCM1Q9NP62 436 aa8.27□□□□□ -1.09
LRRC28-216ENST00000559819 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 IGHV1-46P01743 117 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 S100PP25815 95 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 TNFAIP6P98066 277 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-216ENST00000559819 SPATA31B1PQ5VZV4 182 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 OR4A47Q6IF82 309 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 GAFA1Q96PS6 74 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 GGTLC1Q9BX51 225 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 HINT2Q9BX68 163 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 PXMP4Q9Y6I8 212 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 ICE1Q9Y2F5 2266 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 IGLV3-9A0A075B6K5 115 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 FAM90A9PA6NNJ1 464 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 TM4SF5O14894 197 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 RBFOX2O43251 390 aaKnown RBP eCLIP8.26□□□□□ -1.09
LRRC28-216ENST00000559819 ARL14EPLP0DKL9 152 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 RBMXL3Q8N7X1 1067 aaKnown RBP8.26□□□□□ -1.09
LRRC28-216ENST00000559819 ZNF114Q8NC26 417 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 FAM122AQ96E09 287 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 RNF7Q9UBF6 113 aa8.26□□□□□ -1.09
LRRC28-216ENST00000559819 DSCAMO60469 2012 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 KBTBD11-OT1A0A1B0GTJ5 212 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 C15orf61A6NNL5 157 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 NDUFB4O95168 129 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 HNF1AP20823 631 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 PRSS8Q16651 343 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 PDLIM3Q53GG5 364 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 STUMQ69YW2 141 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 Q6ZS92 163 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 OR52E5Q8NH55 327 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 OR4S2Q8NH73 311 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 RHOVQ96L33 236 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 PYGO2Q9BRQ0 406 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 SRD5A3Q9H8P0 318 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 IDI2-AS1Q9NZ38 188 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 HRASP01112 189 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 C1QTNF9P0C862 333 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 OPRK1P41145 380 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 RPP30P78346 268 aaKnown RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 MRPS11P82912 194 aaKnown RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 C9orf152Q5JTZ5 239 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 FAM222BQ8WU58 562 aa8.25□□□□□ -1.09
LRRC28-216ENST00000559819 RAI1Q7Z5J4 1906 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-216ENST00000559819 TRGV10A0A0A0MS01 117 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 CA2P00918 260 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-216ENST00000559819 ZCCHC24Q8N2G6 241 aaKnown RBP8.24□□□□□ -1.09
LRRC28-216ENST00000559819 TGOLN2O43493 480 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 IL6RP08887 468 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-216ENST00000559819 CCKARP32238 428 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 KIR2DS2P43631 304 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 RAB7AP51149 207 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 FAM209BQ5JX69 171 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 IGFL3Q6UXB1 125 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 LINC01551Q86U37 167 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms