RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 RABL2BQ9UNT1 228 aa3.41□□□□□ -1.86
SNX1-205ENST00000559339 SEC14L6B5MCN3 397 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 LINC01619G3V211 115 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 I3L521 148 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 GPR31O00270 319 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 SOX15O60248 233 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 ATG12O94817 140 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 KBTBD11O94819 623 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 BRI3O95415 125 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 HSPB1P04792 205 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 RLN1P04808 185 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 SERPINE2P07093 398 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 CRYGBP07316 175 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 FGF2P09038 288 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 LGALS1P09382 135 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 OR9G9P0C7N8 305 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 EGR2P11161 476 aaPredicted RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 PGAM2P15259 253 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 NAT1P18440 290 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 F2RP25116 425 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 TAS2R19P59542 299 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 RPL30P62888 115 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 RPL8P62917 257 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 RUNX1Q01196 453 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 SSBP1Q04837 148 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 FHL3Q13643 280 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 IL18Q14116 193 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 C19orf54Q5BKX5 351 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 RNASE10Q5GAN6 216 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 DEFB121Q5J5C9 76 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 VAX1Q5SQQ9 334 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 C9orf66Q5T8R8 295 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 ETV3LQ6ZN32 361 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 ZNF429Q86V71 674 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 LYSMD2Q8IV50 215 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 SLC38A6Q8IZM9 456 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 VKORC1L1Q8N0U8 176 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 ARRDC1Q8N5I2 433 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 OR5T1Q8NG75 326 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 MRAPQ8TCY5 172 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 MYOZ3Q8TDC0 251 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 GPX8Q8TED1 209 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 CASTOR1Q8WTX7 329 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 MOB3AQ96BX8 217 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 DGCR14Q96DF8 476 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 C5orf30Q96GV9 206 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 DIRAS2Q96HU8 199 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 TSC22D3Q99576 134 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 COMMD5Q9GZQ3 224 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 ZNF430Q9H8G1 570 aaPredicted RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 PLEKHA2Q9HB19 425 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 TPSG1Q9NRR2 321 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 FKBP11Q9NYL4 201 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 BET1LQ9NYM9 111 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 COMMD9Q9P000 198 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 THYN1Q9P016 225 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 CCDC59Q9P031 241 aaKnown RBP3.4□□□□□ -1.87
SNX1-205ENST00000559339 ANAPC10Q9UM13 185 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
SNX1-205ENST00000559339 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 FAM223BA6NKX1 122 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 MARCH11A6NNE9 402 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 GABARAPH6UMI1 98 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 CTDSP2O14595 271 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 OVOL1O14753 267 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 WIPF1O43516 503 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 SAP30O75446 220 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 RBMXL2O75526 392 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 PGLYRP1O75594 196 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 SNAPC5O75971 98 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 KRASP01116 189 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 IGHV3-11P01762 117 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 PRB2P02812 416 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 CD3DP04234 171 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 APELAP0DMC3 54 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 HIST1H1BP16401 226 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 HLA-GP17693 338 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 HOXD3P31249 432 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 S100A5P33763 92 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ECI1P42126 302 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 RPL27AP46776 148 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 UCP3P55916 312 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 DGCR2P98153 550 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ATP5G2Q06055 141 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 EGFEM1PQ0D2K5 195 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 EIF4EBP1Q13541 118 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 KIAA0141Q14154 515 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 MEF2DQ14814 521 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 SPCS2Q15005 226 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 RPEL1Q2QD12 228 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 SCGB2B2Q4G0G5 96 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 RNASE12Q5GAN4 147 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 THOC7Q6I9Y2 204 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 HSD17B13Q7Z5P4 300 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 FAM223AQ8IWN6 122 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 PUSL1Q8N0Z8 303 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 TTC9CQ8N5M4 171 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 NECAP1Q8NC96 275 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms