RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 IGHV3OR15-7A0A075B7D8 119 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 F6UZH7 168 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 RBFOX2O43251 390 aaKnown RBP eCLIP13.71□□□□□ -0.21
SPG11-215ENST00000559193 CCL11P51671 97 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 RPL15P61313 204 aaKnown RBP13.71□□□□□ -0.21
SPG11-215ENST00000559193 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
SPG11-215ENST00000559193 UTF1Q5T230 341 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 ABHD12Q8N2K0 398 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 SDSLQ96GA7 329 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 C1orf159Q96HA4 380 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
SPG11-215ENST00000559193 PRR33A8MZF0 331 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 MKRN2OSH3BPM6 223 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 AQP7O14520 342 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 STAG3L2P0CL84 134 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 STAG3L3P0CL85 134 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 ERVK-16P61578 105 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 CR1LQ2VPA4 569 aa13.71□□□□□ -0.22
SPG11-215ENST00000559193 C1orf229Q6ZS94 237 aaPredicted RBP13.71□□□□□ -0.22
SPG11-215ENST00000559193 MGST3O14880 152 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 SLC31A2O15432 143 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 SPRNQ5BIV9 151 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 LRP11Q86VZ4 500 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 OPN3Q9H1Y3 402 aaPredicted RBP13.7□□□□□ -0.22
SPG11-215ENST00000559193 F2RL2O00254 374 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 ZNF664Q8N3J9 261 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 GCSAMQ8N6F7 178 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 TMEM204Q9BSN7 226 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 PLSCR4Q9NRQ2 329 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 TCF19Q9Y242 345 aa13.7□□□□□ -0.22
SPG11-215ENST00000559193 GCGP01275 180 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 CNN1P51911 297 aaKnown RBP13.69□□□□□ -0.22
SPG11-215ENST00000559193 ZNRF1Q8ND25 227 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 FAM216AQ8WUB2 273 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 DDB2Q92466 427 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 S1PR3Q99500 378 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
SPG11-215ENST00000559193 LSM4Q9Y4Z0 139 aaKnown RBP13.69□□□□□ -0.22
SPG11-215ENST00000559193 HCFC1P51610 2035 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 SCO2A0A1W2PP80 73 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 ZNF320A2RRD8 509 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 TNFSF13O75888 250 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 MZT1Q08AG7 82 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 SFRP2Q96HF1 295 aa13.69□□□□□ -0.22
SPG11-215ENST00000559193 M0R296 226 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 CXorf1O96002 111 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 SSMEM1Q8WWF3 244 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 LEAP2Q969E1 77 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 IMMP2LQ96T52 175 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 SPENQ96T58 3664 aaKnown RBP13.68□□□□□ -0.22
SPG11-215ENST00000559193 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
SPG11-215ENST00000559193 TRGV8A0A0C4DH27 118 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 FOXL1Q12952 345 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
SPG11-215ENST00000559193 TMEM18Q96B42 140 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 SARAFQ96BY9 339 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 CALYQ9NYX4 217 aa13.68□□□□□ -0.22
SPG11-215ENST00000559193 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
SPG11-215ENST00000559193 PRRC2CQ9Y520 2896 aaKnown RBP13.67□□□□□ -0.22
SPG11-215ENST00000559193 A0A1B0GV90 55 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 ZNF705GA8MUZ8 300 aaPredicted RBP13.67□□□□□ -0.22
SPG11-215ENST00000559193 A8MWP6 167 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
SPG11-215ENST00000559193 COL8A2P25067 703 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
SPG11-215ENST00000559193 GBGT1Q8N5D6 347 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 PPP1R35Q8TAP8 253 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 ELOVL5Q9NYP7 299 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 DKK4Q9UBT3 224 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 TRAPPC1Q9Y5R8 145 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 SLC25A15Q9Y619 301 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 CGAP01215 116 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 CFHR2P36980 270 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 KIR2DS2P43631 304 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 WFIKKN1Q96NZ8 548 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 PROCRQ9UNN8 238 aa13.67□□□□□ -0.22
SPG11-215ENST00000559193 MDFIC2A0A1B0GVS7 189 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 SELLP14151 372 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 IGFL2Q6UWQ7 119 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 MOGAT3Q86VF5 341 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 OR4S2Q8NH73 311 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 A0A1B0GUS0 222 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 CGB3P0DN86 165 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 CGB7P0DN87 165 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 HNF1AP20823 631 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 C1orf174Q8IYL3 243 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 BTF3L4Q96K17 158 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 NOL4LQ96MY1 436 aaPredicted RBP13.66□□□□□ -0.22
SPG11-215ENST00000559193 NPVFQ9HCQ7 196 aa13.66□□□□□ -0.22
SPG11-215ENST00000559193 SEPSECSQ9HD40 501 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms