RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SULT1B1O43704 296 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 APOEP02649 317 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 ZNF7P17097 686 aaPredicted RBP4.97□□□□□ -1.61
CASC4-208ENST00000559151 NPPCP23582 126 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 MYL6P60660 151 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 RPS24P62847 133 aaKnown RBP4.97□□□□□ -1.61
CASC4-208ENST00000559151 DR1Q01658 176 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 ZNF565Q8N9K5 539 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 OR4K13Q8NH42 304 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 FNDC9Q8TBE3 224 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 TMEM109Q9BVC6 243 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 ATPIF1Q9UII2 106 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 QSER1Q2KHR3 1735 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 TNS3Q68CZ2 1445 aa4.97□□□□□ -1.61
CASC4-208ENST00000559151 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 CDC42BPGQ6DT37 1551 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 ANKRD30AQ9BXX3 1397 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 SLC16A4O15374 487 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 TMEM33P57088 247 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 SNAP25P60880 206 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 OR52B2Q96RD2 323 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 MND1Q9BWT6 205 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 PARP4Q9UKK3 1724 aaKnown RBP4.96□□□□□ -1.62
CASC4-208ENST00000559151 CASP8AP2Q9UKL3 1982 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 KCPQ6ZWJ8 1503 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 OVOS2A0A0G2JMS6 1433 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 OVOS2A0A0J9YW53 1432 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 OVOS2Q6IE36 1432 aa4.96□□□□□ -1.62
CASC4-208ENST00000559151 PAPPAQ13219 1627 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 A0A0J9YX75 114 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 CXCR6O00574 342 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 UBE2IP63279 158 aaKnown RBP4.95□□□□□ -1.62
CASC4-208ENST00000559151 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 CCDC121Q6ZUS5 278 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 KRTAP13-1Q8IUC0 172 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 OR2D3Q8NGH3 330 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
CASC4-208ENST00000559151 NKX6-2Q9C056 277 aaPredicted RBP4.95□□□□□ -1.62
CASC4-208ENST00000559151 SLC2A9Q9NRM0 540 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 CCDC144AA2RUR9 1427 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 ANKRD50Q9ULJ7 1429 aa4.95□□□□□ -1.62
CASC4-208ENST00000559151 PXDNLA1KZ92 1463 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 TNRC6CQ9HCJ0 1690 aaKnown RBP4.94□□□□□ -1.62
CASC4-208ENST00000559151 ODF3BA8MYP8 253 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 CCL3P10147 92 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 CRHBPP24387 322 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 CD200P41217 278 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 SERPINB10P48595 397 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 B2MP61769 119 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 ZNF181Q2M3W8 571 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 N4BP2L1Q5TBK1 243 aaPredicted RBP4.94□□□□□ -1.62
CASC4-208ENST00000559151 COMMD7Q86VX2 200 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 LRRC34Q8IZ02 419 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 CDC26Q8NHZ8 85 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 PIGXQ8TBF5 258 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 C16orf78Q8WTQ4 265 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 HES4Q9HCC6 221 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 TXNL4BQ9NX01 149 aaKnown RBP4.94□□□□□ -1.62
CASC4-208ENST00000559151 ZNF337Q9Y3M9 751 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 POLR3HQ9Y535 204 aaPredicted RBP4.94□□□□□ -1.62
CASC4-208ENST00000559151 FMN2Q9NZ56 1722 aa4.94□□□□□ -1.62
CASC4-208ENST00000559151 ARHGEF10O15013 1369 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 OTOFQ9HC10 1997 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 REG1AP05451 166 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 BLVRBP30043 206 aaPredicted RBP4.93□□□□□ -1.62
CASC4-208ENST00000559151 CTBP2P56545 445 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 ARPC4P59998 168 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 FAM173BQ6P4H8 233 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 AMTNQ6UX39 209 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 C10orf71Q711Q0 1435 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 OR4C16Q8NGL9 310 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 MS4A6EQ96DS6 147 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 CCL26Q9Y258 94 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 ATP7BP35670 1465 aa4.93□□□□□ -1.62
CASC4-208ENST00000559151 KIF1AQ12756 1690 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 ABCC11Q96J66 1382 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 TMED7-TICAM2A0A0A6YYA0 188 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 SLC17A3O00476 420 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 OR5F1O95221 314 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 RPL12P30050 165 aaKnown RBP4.92□□□□□ -1.62
CASC4-208ENST00000559151 GTF2A1P52655 376 aaPredicted RBP4.92□□□□□ -1.62
CASC4-208ENST00000559151 CPNE2Q96FN4 548 aaPredicted RBP4.92□□□□□ -1.62
CASC4-208ENST00000559151 DKKL1Q9UK85 242 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 POLR1DQ9Y2S0 133 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 CLTCL1P53675 1640 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 CICQ96RK0 1608 aaPredicted RBP4.92□□□□□ -1.62
CASC4-208ENST00000559151 TRPM6Q9BX84 2022 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 ADAMTS7Q9UKP4 1686 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 KNDC1Q76NI1 1749 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 PKD1L3Q7Z443 1732 aa4.92□□□□□ -1.62
CASC4-208ENST00000559151 PPLO60437 1756 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 AKAP12Q02952 1782 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 HFM1A2PYH4 1435 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 KIF1BO60333 1816 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 ZNF878C9JN71 531 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 LRRN3E7EW58 273 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 MT-CO2P00403 227 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 IL3P08700 152 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms