RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 PLCH2O75038 1416 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 THSD7AQ9UPZ6 1657 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 COL4A2P08572 1712 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 IGHV1-69-2A0A0G2JMI3 117 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 A0A0J9YX75 114 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 C19orf71A6NCJ1 209 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 C9JCJ5 164 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 SLC17A3O00476 420 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 COX7A2LO14548 114 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 UBFD1O14562 309 aaKnown RBP1.04□□□□□ -2.24
VPS13C-207ENST00000558919 CHP2O43745 196 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 FADS1O60427 444 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 SOD1P00441 154 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 KCNE1P15382 129 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 CRHBPP24387 322 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 CRYBB3P26998 211 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 S100A5P33763 92 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 CD200P41217 278 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 ERVS71-1P61550 626 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 TBPL1P62380 186 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 IFITM2Q01629 132 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 GNA12Q03113 381 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 EDDM3AQ14507 147 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 C1orf158Q8N1D5 194 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 UMODL1-AS1Q8N2C9 162 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 SLC22A24Q8N4F4 322 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 TMEM86BQ8N661 226 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 RNASE11Q8TAA1 199 aaKnown RBP1.04□□□□□ -2.24
VPS13C-207ENST00000558919 LHFPL5Q8TAF8 219 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 RPS4Y2Q8TD47 263 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 ROPN1LQ96C74 230 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 DNAJC30Q96LL9 226 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 CCL13Q99616 98 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 ULBP3Q9BZM4 244 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 TRIM4Q9C037 500 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 GLTPQ9NZD2 209 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 AK3Q9UIJ7 227 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 FBXO5Q9UKT4 447 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 ANGPT4Q9Y264 503 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 MINOS1-NBL1R4GNA1 71 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 SCN9AQ15858 1988 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 FLT4P35916 1363 aa1.04□□□□□ -2.24
VPS13C-207ENST00000558919 NCKAP5O14513 1909 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 MUC21A0A0G2JKD1 596 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 MUC21A0A140T8X8 626 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 A0A1B0GW54 56 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 PQLC2LA1A4F0 135 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 OR11H12B2RN74 326 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 INMT-MINDY4F8WBC2 141 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 H3BPC8 53 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 BHLHE40O14503 412 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 ZNF189O75820 626 aaPredicted RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CNIH1O95406 144 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 SERPINA1P01009 418 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 IGHV1-69P01742 117 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 GZMBP10144 247 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CCL3P10147 92 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 FGF6P10767 208 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 RPL27AP46776 148 aaKnown RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CAPZBP47756 277 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 GABRA2P47869 451 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 SERPINB10P48595 397 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 ZNF140P52738 457 aaPredicted RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TAS2R30P59541 319 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 FKBP1AP62942 108 aaKnown RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TNFAIP6P98066 277 aaPredicted RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 ACOT6Q3I5F7 207 aaPredicted RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TMEM97Q5BJF2 176 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 GLT8D1Q68CQ7 371 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 GPHB5Q86YW7 130 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 C20orf196Q8IYI0 205 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TBC1D19Q8N5T2 526 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 PACRGLQ8N7B6 248 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 OR13C8Q8NGS7 320 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 OR2T4Q8NH00 348 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 OR11H2Q8NH07 326 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 DGCR14Q96DF8 476 aaKnown RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 SFRP2Q96HF1 295 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 BTF3L4Q96K17 158 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CNBD2Q96M20 576 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 NMNAT3Q96T66 252 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CMSS1Q9BQ75 279 aaKnown RBP1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TXNDC17Q9BRA2 123 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 MIEN1Q9BRT3 115 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TMEM222Q9H0R3 208 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TLNRD1Q9H1K6 362 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 CXCL16Q9H2A7 254 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 DOK5Q9P104 306 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 TAAR3PQ9P1P4 343 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 PKIGQ9Y2B9 76 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 COQ4Q9Y3A0 265 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 ZFYVE9O95405 1425 aa1.03□□□□□ -2.24
VPS13C-207ENST00000558919 MDC1Q14676 2089 aaKnown RBP1.03□□□□□ -2.25
VPS13C-207ENST00000558919 A0A087WUJ7 227 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 A0A087WUU8 490 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 VPS37CA5D8V6 355 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 TMEM235A6NFC5 223 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 OR5K4A6NMS3 321 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 LST1O00453 97 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms