RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ZNF835Q9Y2P0 537 aa12.95□□□□□ -0.34
AP4E1-202ENST00000558439 OR10J1P30954 320 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
AP4E1-202ENST00000558439 LRRC10Q5BKY1 277 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
AP4E1-202ENST00000558439 SAP30LQ9HAJ7 183 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 ZGRF1Q86YA3 2104 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 PLAUP00749 431 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 FOLR2P14207 255 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 CRISP2P16562 243 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 CYP2G1PQ6ZSU1 146 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 YLPM1P49750 1951 aaKnown RBP12.94□□□□□ -0.34
AP4E1-202ENST00000558439 J3QW42 95 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
AP4E1-202ENST00000558439 ZNF146Q15072 292 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 MED12LQ86YW9 2145 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 ZNF439Q8NDP4 499 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
AP4E1-202ENST00000558439 A0A087WWC5 75 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 HELTA6NFD8 242 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 RBPJQ06330 500 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 IQCJQ1A5X6 159 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 WDR86Q86TI4 376 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 COX7A1P24310 79 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 MDS2Q8NDY4 140 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 ADTRPQ96IZ2 230 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 GP6Q9HCN6 339 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 MLNRO43193 412 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 IL3RAP26951 378 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 FAM216BQ8N7L0 139 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 CMTM2Q8TAZ6 248 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 MS4A5Q9H3V2 200 aa12.93□□□□□ -0.34
AP4E1-202ENST00000558439 GRIFINA4D1Z8 144 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 OR9G9P0C7N8 305 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 GATA2P23769 480 aaPredicted RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 CAMPP49913 170 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 CNN1P51911 297 aaKnown RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 SRSF7Q16629 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 Q6ZS49 121 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 TCTEX1D1Q8N7M0 179 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 OR5B3Q8NH48 314 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 GAL3ST2Q9H3Q3 398 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 RNF115Q9Y4L5 304 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 KIR2DL2P43627 348 aaPredicted RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 HSPE1P61604 102 aaKnown RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 TECRQ9NZ01 308 aaKnown RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 LINC00473A8K010 186 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 CDX4O14627 284 aaPredicted RBP12.92□□□□□ -0.34
AP4E1-202ENST00000558439 TXN2Q99757 166 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 JPT1Q9UK76 154 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 PRNDQ9UKY0 176 aa12.92□□□□□ -0.34
AP4E1-202ENST00000558439 A0A1W2PRD5 423 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 A0A1W2PRF3 423 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 A0A1W2PRM7 423 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 COQ2Q96H96 371 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
AP4E1-202ENST00000558439 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 RRHO14718 337 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 SS18L1O75177 396 aaPredicted RBP12.91□□□□□ -0.34
AP4E1-202ENST00000558439 MBD3L1Q8WWY6 194 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 NUP210LQ5VU65 1888 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 G0S2P27469 103 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 TPPP2P59282 170 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 CA5BP1Q8WTZ4 195 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 FLYWCH2Q96CP2 140 aaKnown RBP12.91□□□□□ -0.34
AP4E1-202ENST00000558439 SRD5A3Q9H8P0 318 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 ZNF586Q9NXT0 402 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 CA2P00918 260 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 FOXC1Q12948 553 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 FXYD3Q14802 87 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 ACSF3Q4G176 576 aaPredicted RBP12.91□□□□□ -0.34
AP4E1-202ENST00000558439 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 PARD6AQ9NPB6 346 aa12.91□□□□□ -0.34
AP4E1-202ENST00000558439 LRP4O75096 1905 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 SLC17A3O00476 420 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CEACAM1P13688 526 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CRYBB3P26998 211 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CD82P27701 267 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CHRNB4P30926 498 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 BPIFB3P59826 476 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 VMA21Q3ZAQ7 101 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 SGK494Q96LW2 274 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 MPDU1O75352 247 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 SOD3P08294 240 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 PAX6P26367 422 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 KIAA1644Q3SXP7 199 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms