RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 GFRA1P56159 465 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 RPL32P62910 135 aaKnown RBP4.65□□□□□ -1.67
GABPB1-207ENST00000558335 SEC11AP67812 179 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 TGIF1Q15583 401 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM177Q53S58 311 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 ACTL10Q5JWF8 245 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 C19orf35Q6ZS72 473 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 H2BFWTQ7Z2G1 175 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 BOD1L2Q8IYS8 172 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM251Q8N6I4 163 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 ZFP62Q8NB50 900 aaPredicted RBP4.65□□□□□ -1.67
GABPB1-207ENST00000558335 PPP1R35Q8TAP8 253 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 SLC25A40Q8TBP6 338 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 OR5P3Q8WZ94 311 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 GMPPAQ96IJ6 420 aaPredicted RBP4.65□□□□□ -1.67
GABPB1-207ENST00000558335 HDHD3Q9BSH5 251 aaPredicted RBP4.65□□□□□ -1.67
GABPB1-207ENST00000558335 C20orf24Q9BUV8 137 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 QTRT1Q9BXR0 403 aaKnown RBP4.65□□□□□ -1.67
GABPB1-207ENST00000558335 PROK2Q9HC23 129 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 SLC39A9Q9NUM3 307 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 PSENENQ9NZ42 101 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 PRR13Q9NZ81 148 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 TAAR3PQ9P1P4 343 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 CYSLTR1Q9Y271 337 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 U3KQA8 63 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 SEC16AO15027 2179 aa4.65□□□□□ -1.67
GABPB1-207ENST00000558335 IGKV1-12A0A0C4DH73 117 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 CTXND1A0A1B0GTU2 59 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 hADV38S2A0JD32 116 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM30CPA0ZSE6 113 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 PSMB11A5LHX3 300 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 OOEPA6NGQ2 149 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 E9PLN8 166 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 IFNL4K9M1U5 179 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ATXN7O15265 892 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SIVA1O15304 175 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 HYPMO75409 117 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 IGKV1D-12P01611 117 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 JMJD7P0C870 316 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 BCL3P20749 454 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 KIR2DS2P43631 304 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 REG1BP48304 166 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 HIST1H1AQ02539 215 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ICAM4Q14773 271 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF146Q15072 292 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 LRRC75BQ2VPJ9 315 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM30BQ3MIR4 351 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SPATA45Q537H7 98 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF324BQ6AW86 544 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SLC23A3Q6PIS1 610 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SPSB3Q6PJ21 355 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 FOXI2Q6ZQN5 318 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF818PQ6ZRF7 136 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 PPP1R32Q7Z5V6 425 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ST6GALNAC3Q8NDV1 305 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 OR1B1Q8NGR6 318 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 OR51H1Q8NH63 302 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 CMTM2Q8TAZ6 248 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF775Q96BV0 537 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 DUX5Q96PT3 197 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 HSD17B10Q99714 261 aaKnown RBP4.64□□□□□ -1.67
GABPB1-207ENST00000558335 DERL1Q9BUN8 251 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 TMEM147Q9BVK8 224 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SAMD10Q9BYL1 202 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 SH3BGRL3Q9H299 93 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 PARLQ9H300 379 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 OBP2BQ9NPH6 170 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 NAT8BQ9UHF3 227 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 PSG8Q9UQ74 426 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 RNF115Q9Y4L5 304 aa4.64□□□□□ -1.67
GABPB1-207ENST00000558335 NCOA6Q14686 2063 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 LRRC3CA6NJW4 275 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF727A8MUV8 499 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 H0YL77 283 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 HS3ST1O14792 307 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 RAB29O14966 203 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 CST7O76096 145 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 HLA-DRB1P01911 266 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 ADH4P08319 380 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 NPY1RP25929 384 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 PPP1CCP36873 323 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 KIR2DL2P43627 348 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 RPS16P62249 146 aaKnown RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 MEF2BQ02080 365 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 SLC38A11Q08AI6 406 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 SMAGPQ0VAQ4 97 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 CXorf66Q5JRM2 361 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 WIPI1Q5MNZ9 446 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-207ENST00000558335 TSPO2Q5TGU0 170 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 AMMECR1LQ6DCA0 310 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 SLC35E4Q6ICL7 350 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 UFSP1Q6NVU6 142 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 UNQ5815/PRO19632Q6UWF5 114 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 FAM180AQ6UWF9 173 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 ZNF497Q6ZNH5 498 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 CYP2G1PQ6ZSU1 146 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 RNF144BQ7Z419 303 aa4.63□□□□□ -1.67
GABPB1-207ENST00000558335 FAM90A1Q86YD7 464 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms