RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 RNF167Q9H6Y7 350 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 RHBDL2Q9NX52 303 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 TNCP24821 2201 aa11.79□□□□□ -0.52
TPM1-211ENST00000558314 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
TPM1-211ENST00000558314 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 A8MZ25 164 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 AIREO43918 545 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 SCGNO76038 276 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 TPPPO94811 219 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 IL6RP08887 468 aaPredicted RBP11.78□□□□□ -0.52
TPM1-211ENST00000558314 MYOD1P15172 320 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 FXYD4P59646 89 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 GVQW1Q8N7I0 195 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 OR5H6Q8NGV6 325 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
TPM1-211ENST00000558314 NEURL2Q9BR09 285 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 Q9H521 79 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 CCL28Q9NRJ3 127 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 SLC2A8Q9NY64 477 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 TENM2Q9NT68 2774 aa11.78□□□□□ -0.52
TPM1-211ENST00000558314 TRBV9A0A0B4J1U6 114 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 MRPS14O60783 128 aaKnown RBP11.77□□□□□ -0.53
TPM1-211ENST00000558314 NDUFB8O95169 186 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 CD7P09564 240 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 DEFA4P12838 97 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 AREGP15514 252 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 FGF9P31371 208 aaPredicted RBP11.77□□□□□ -0.53
TPM1-211ENST00000558314 FCGR2CP31995 323 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 BEST4Q8NFU0 473 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 FCGR1BQ92637 280 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
TPM1-211ENST00000558314 WFDC10AQ9H1F0 79 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 CEPT1Q9Y6K0 416 aa11.77□□□□□ -0.53
TPM1-211ENST00000558314 MEIS3P1A6NDR6 274 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 E7EUB6 86 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 GGCTO75223 188 aaKnown RBP11.76□□□□□ -0.53
TPM1-211ENST00000558314 ATP6V1G2O95670 118 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 HRASP01112 189 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 FOLR2P14207 255 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 RPA2P15927 270 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 ARL3P36405 182 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 OR13F1Q8NGS4 319 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
TPM1-211ENST00000558314 THAP7Q9BT49 309 aaPredicted RBP11.76□□□□□ -0.53
TPM1-211ENST00000558314 SLC5A7Q9GZV3 580 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 SIGLEC8Q9NYZ4 499 aa11.76□□□□□ -0.53
TPM1-211ENST00000558314 C2orf70A6NJV1 201 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 SULT1C2O00338 296 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 DHFRP00374 187 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 RPL8P62917 257 aaKnown RBP11.75□□□□□ -0.53
TPM1-211ENST00000558314 NEDD8Q15843 81 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 ZNF66Q6ZN08 573 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 TMEM17Q86X19 198 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
TPM1-211ENST00000558314 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
TPM1-211ENST00000558314 LCE6AA0A183 80 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 A0A1B0GW64 132 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 NPIPB5A8MRT5 1133 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 HLA-GP17693 338 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 PSMB6P28072 239 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 MAS1LP35410 378 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 KIR2DS2P43631 304 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
TPM1-211ENST00000558314 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 SCAF4O95104 1147 aaKnown RBP11.73□□□□□ -0.53
TPM1-211ENST00000558314 PPYP01298 95 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 MECP2P51608 486 aaKnown RBP11.73□□□□□ -0.53
TPM1-211ENST00000558314 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
TPM1-211ENST00000558314 TIMM50Q3ZCQ8 353 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 HOGA1Q86XE5 327 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 DIABLOQ9NR28 239 aa11.73□□□□□ -0.53
TPM1-211ENST00000558314 ETV7Q9Y603 341 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms