RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ESRRGP62508 458 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 GNB1P62873 340 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 IFITM2Q01629 132 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 GNA12Q03113 381 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 TFF3Q07654 80 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PAFAH1B3Q15102 231 aaKnown RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 RGNQ15493 299 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PRR4Q16378 134 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 Q499Y3 187 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CENPWQ5EE01 88 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 NHLRC3Q5JS37 347 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 TSPO2Q5TGU0 170 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM236Q5W0B7 351 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PAMR1Q6UXH9 720 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CLVS1Q8IUQ0 354 aaPredicted RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM61Q8N0U2 210 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 OR5K1Q8NHB7 308 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 RXFP4Q8TDU9 374 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM190Q8WZ59 177 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CCL17Q92583 94 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 AURKBQ96GD4 344 aaPredicted RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 DIRAS2Q96HU8 199 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 IP6K3Q96PC2 410 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 SIGLEC12Q96PQ1 595 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 C19orf24Q9BVV8 132 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 GFRA4Q9GZZ7 299 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CCL28Q9NRJ3 127 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 RWDD2AQ9UIY3 292 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PYCARDQ9ULZ3 195 aa3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CARHSP1Q9Y2V2 147 aaKnown RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 PCYT1BQ9Y5K3 369 aaPredicted RBP3.06□□□□□ -1.92
LRRC28-205ENST00000558248 CIB4A0PJX0 185 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 C5orf49A4QMS7 147 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 PGPA6NDG6 321 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 EEF1E1-BLOC1S5C9J1V9 151 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 H3BP45 60 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 M0QYV0 167 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 EEF1E1O43324 174 aaKnown RBP3.05□□□□□ -1.92
LRRC28-205ENST00000558248 PDE6DO43924 150 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 SPAG7O75391 227 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 CYB5R3P00387 301 aaPredicted RBP3.05□□□□□ -1.92
LRRC28-205ENST00000558248 MT-CO2P00403 227 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 CA2P00918 260 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 TRBV12-3P01733 135 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 HBZP02008 142 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 REG1AP05451 166 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 OR10J4P0C629 311 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 CXCL3P19876 107 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 COX7A1P24310 79 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 OR3A4PP47883 348 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 MARCKSL1P49006 195 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 RPL34P49207 117 aaKnown RBP3.05□□□□□ -1.92
LRRC28-205ENST00000558248 CDC42P60953 191 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 RAB2AP61019 212 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 PSPHP78330 225 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 HPCAP84074 193 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF45Q02386 682 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 EGFEM1PQ0D2K5 195 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 IAH1Q2TAA2 248 aaPredicted RBP3.05□□□□□ -1.92
LRRC28-205ENST00000558248 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ZC2HC1BQ5TFG8 222 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ELP2Q6IA86 826 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 TBPL2Q6SJ96 375 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 SCGB1D4Q6XE38 83 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF493Q6ZR52 646 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 MOB1BQ7L9L4 216 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 DOLPP1Q86YN1 238 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 DEFB106AQ8N104 65 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF439Q8NDP4 499 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 SLC35G5Q96KT7 338 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ARHGDIGQ99819 225 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 PRSS27Q9BQR3 290 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 Q9H3A6 140 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 RBFOX1Q9NWB1 397 aaKnown RBP3.05□□□□□ -1.92
LRRC28-205ENST00000558248 IDI2-AS1Q9NZ38 188 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM216Q9P0N5 145 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 SLC35A3Q9Y2D2 325 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 PYGO1Q9Y3Y4 419 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 ANKRD12Q6UB98 2062 aa3.05□□□□□ -1.92
LRRC28-205ENST00000558248 IGLV3-10A0A075B6K4 115 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 TRAV17A0A0B4J275 112 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 CXorf51AA0A1B0GTR3 108 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 EXOC1LA0A1B0GW35 172 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 IGSF23A1L1A6 192 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 CD300LBA8K4G0 201 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 A8MXK9 166 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 SLC17A3O00476 420 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 CST8O60676 142 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 DHRS3O75911 302 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 OR2A4O95047 310 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 FABP3P05413 133 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ZSCAN5DPP0CG00 497 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ESDP10768 282 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 PGAM2P15259 253 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF708P17019 499 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 CXCL2P19875 107 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 PRTN3P24158 256 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 HSPE1P61604 102 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms