RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SMAD5-AS1Q9Y6J3 95 aa7.77□□□□□ -1.17
USP3-207ENST00000558218 DNAH3Q8TD57 4116 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 TRBV9A0A0B4J1U6 114 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 IGKV1D-13A0A0B4J2D9 117 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 TRIM64CA6NLI5 447 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 PPYP01298 95 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 SAA1P0DJI8 122 aaPredicted RBP7.76□□□□□ -1.17
USP3-207ENST00000558218 IGKV1-13P0DP09 117 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 RPS19P39019 145 aaKnown RBP7.76□□□□□ -1.17
USP3-207ENST00000558218 RPL30P62888 115 aaKnown RBP7.76□□□□□ -1.17
USP3-207ENST00000558218 TNXAQ16473 311 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 UBE2NLQ5JXB2 153 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 PUSL1Q8N0Z8 303 aaKnown RBP7.76□□□□□ -1.17
USP3-207ENST00000558218 CADM3Q8N126 398 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 NECAP1Q8NC96 275 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 TMEM167AQ8TBQ9 72 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 ACOT12Q8WYK0 555 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 PRR25Q96S07 402 aa7.76□□□□□ -1.17
USP3-207ENST00000558218 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
USP3-207ENST00000558218 H0Y980 276 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 J3QRK9 145 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 MPPED1O15442 326 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 PAX4O43316 350 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 KBTBD11O94819 623 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 IGLV1-51P01701 117 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 NAT1P18440 290 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 BRWD1-AS2P59051 145 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 ATP5G2Q06055 141 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 CATR1Q13166 79 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 KLK9Q2XQG4 91 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 GVQW1Q8N7I0 195 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 OR13F1Q8NGS4 319 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 TCTEX1D2Q8WW35 142 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 SLC25A46Q96AG3 418 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 WWC2-AS2Q96NR7 200 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 CCL28Q9NRJ3 127 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 SLC2A9Q9NRM0 540 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 COA4Q9NYJ1 87 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 BET1LQ9NYM9 111 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 KLK9Q9UKQ9 250 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 ZNF257Q9Y2Q1 563 aa7.75□□□□□ -1.17
USP3-207ENST00000558218 SMIM31A0A1B0GVY4 71 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 NPIPB5A8MRT5 1133 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 A8MZ25 164 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 DHFRP00374 187 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 HPRT1P00492 218 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 CRYGCP07315 174 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 GP9P14770 177 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 SPNP16150 400 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 HIST1H1BP16401 226 aaKnown RBP7.74□□□□□ -1.17
USP3-207ENST00000558218 TAS2R31P59538 309 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 TAS2R46P59540 309 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 RHOGP84095 191 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 DYRK1AQ13627 763 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 POU2AF1Q16633 256 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 TMEM69Q5SWH9 247 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 IDO2Q6ZQW0 420 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 ANKRD13BQ86YJ7 626 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 SAMD12Q8N8I0 201 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 OR9G4Q8NGQ1 327 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 SECTM1Q8WVN6 248 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 SRSF8Q9BRL6 282 aaKnown RBP7.74□□□□□ -1.17
USP3-207ENST00000558218 SLC5A7Q9GZV3 580 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 PLEKHA2Q9HB19 425 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 TAS2R8Q9NYW2 309 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 ADAM30Q9UKF2 790 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 ANAPC10Q9UM13 185 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 U3KQK5 164 aa7.74□□□□□ -1.17
USP3-207ENST00000558218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
USP3-207ENST00000558218 ANKRD34BA5PLL1 514 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 TPPPO94811 219 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 LY86O95711 162 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 APOA1P02647 267 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 IL6RP08887 468 aaPredicted RBP7.73□□□□□ -1.17
USP3-207ENST00000558218 ZNF735P0CB33 412 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 NQO2P16083 231 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 PRSS3P35030 304 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 RPL27AP46776 148 aaKnown RBP7.73□□□□□ -1.17
USP3-207ENST00000558218 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
USP3-207ENST00000558218 RPEL1Q2QD12 228 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 C11orf87Q6NUJ2 197 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 LPCAT3Q6P1A2 487 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 SPAG16Q8N0X2 631 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 MISP3Q96FF7 219 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 SCPEP1Q9HB40 452 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 AKIP1Q9NQ31 210 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 IFT46Q9NQC8 304 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 PEMTQ9UBM1 199 aa7.73□□□□□ -1.17
USP3-207ENST00000558218 DPPA5A6NC42 116 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 TEX22C9J3V5 150 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 H3BS24 57 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 SULT1C2O00338 296 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 HLA-GP17693 338 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 GNRHRP30968 328 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 RORCP51449 518 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 MECP2P51608 486 aaKnown RBP7.72□□□□□ -1.17
USP3-207ENST00000558218 TAS2R20P59543 309 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 HERV-K104P61576 105 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 ZNF45Q02386 682 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 OR2B11Q5JQS5 317 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms