RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 HES4Q9HCC6 221 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 PRTFDC1Q9NRG1 225 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 RBFOX1Q9NWB1 397 aaKnown RBP1.79□□□□□ -2.12
SPG11-206ENST00000558093 SPANXCQ9NY87 97 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 NAT8BQ9UHF3 227 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 DNAJC12Q9UKB3 198 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 ZFP30Q9Y2G7 519 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 CARMIL3Q8ND23 1372 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 NPHP4O75161 1426 aaPredicted RBP1.79□□□□□ -2.12
SPG11-206ENST00000558093 PTPRKQ15262 1439 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 ABCC10Q5T3U5 1492 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 MAGI1Q96QZ7 1491 aaPredicted RBP1.79□□□□□ -2.12
SPG11-206ENST00000558093 ZCCHC11Q5TAX3 1644 aaKnown RBP1.79□□□□□ -2.12
SPG11-206ENST00000558093 RALGAPA2Q2PPJ7 1873 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 DOCK4Q8N1I0 1966 aa1.79□□□□□ -2.12
SPG11-206ENST00000558093 NUP205Q92621 2012 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 FER1L6Q2WGJ9 1857 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ZSWIM8A7E2V4 1837 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ANKRD26Q9UPS8 1709 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 REREQ9P2R6 1566 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CEP162Q5TB80 1403 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ABCC12Q96J65 1359 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 hCG_1818297A0A087WSY0 165 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SMIM26A0A096LP01 95 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 IGHV3-66A0A0C4DH42 116 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 A0A0J9YY10 115 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 A0A1B0GV50 99 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 A0A1B0GW64 132 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 A0A1B0GX78 115 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 DUXBA0A1W2PPF3 345 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 C5orf49A4QMS7 147 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 FAM183AA6NL82 134 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SIGLEC16A6NMB1 481 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 KNCNA6PVL3 124 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 A8MT66 165 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 FABP5P3A8MUU1 101 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 LEUTXA8MZ59 168 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 C9JAW5 83 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 CCL25O15444 150 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ZNF682O95780 498 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR2H2O95918 312 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 IGHMP01871 453 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 IGHV3-43DP0DP04 118 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 RAB3BP20337 219 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CNTFRP26992 372 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CD70P32970 193 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 GFERP55789 205 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 TAS2R46P59540 309 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 NCS1P62166 190 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SNRPD2P62316 118 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 RPS25P62851 125 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 RPS28P62857 69 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 HLA-DRB3P79483 266 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 IFITM3Q01628 133 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 PAFAH1B3Q15102 231 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 SSX1Q16384 188 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 BATFQ16520 125 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SCGB2B2Q4G0G5 96 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 MORN2Q502X0 79 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 HSD17B12Q53GQ0 312 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CENPWQ5EE01 88 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 TMEM69Q5SWH9 247 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 LDLRAD2Q5SZI1 272 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 IBA57Q5T440 356 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 TMEM236Q5W0B7 351 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ZNF880Q6PDB4 577 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 RASL11AQ6T310 242 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CLEC19AQ6UXS0 136 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SCGB1D4Q6XE38 83 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SHISA6Q6ZSJ9 500 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 Q6ZSR6 202 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 DAZ4Q86SG3 579 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 CROCCP2Q86T23 111 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 C20orf196Q8IYI0 205 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR8I2Q8N0Y5 310 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 TMEM229BQ8NBD8 167 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 C11orf72Q8NBR9 251 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 LY6G5BQ8NDX9 201 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR5A1Q8NGJ0 315 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR10J6PQ8NGY7 276 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR10G6Q8NH81 332 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR1L1Q8NH94 360 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 CT55Q8WUE5 264 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 ORAOV1Q8WV07 137 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 GEMIN6Q8WXD5 167 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 TMEM159Q96B96 161 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 FAM3DQ96BQ1 224 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 PLEKHB2Q96CS7 222 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 RMI2Q96E14 147 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 SMIM8Q96KF7 97 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR2A5Q96R48 311 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 LINC01587Q99440 93 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 PRSS27Q9BQR3 290 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 OR2H1Q9GZK4 316 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 EDA2RQ9HAV5 297 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 GPR84Q9NQS5 396 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 DAZ1Q9NQZ3 744 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 MRPL16Q9NX20 251 aaKnown RBP1.78□□□□□ -2.12
SPG11-206ENST00000558093 RBM12B-AS1Q9P1G2 102 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms