RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NPIPB5A8MRT5 1133 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 TEX22C9J3V5 150 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 E7EUB6 86 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 GGCTO75223 188 aaKnown RBP12.02□□□□□ -0.49
TUBB3-213ENST00000557262 KBTBD11O94819 623 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-213ENST00000557262 KIR2DS2P43631 304 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 RPL27AP46776 148 aaKnown RBP12.02□□□□□ -0.49
TUBB3-213ENST00000557262 BRWD1-AS2P59051 145 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 DEFB114Q30KQ6 69 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-213ENST00000557262 FCGR1BQ92637 280 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
TUBB3-213ENST00000557262 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 LYSTQ99698 3801 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 LGALS9O00182 355 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 TPPPO94811 219 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 OR2C1O95371 312 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 HRASP01112 189 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 ZNF735P0CB33 412 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 CD81P60033 236 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 SFXN4Q6P4A7 337 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 LGALS14Q8TCE9 139 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
TUBB3-213ENST00000557262 NEURL2Q9BR09 285 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 YTHDF1Q9BYJ9 559 aaKnown RBP12.01□□□□□ -0.49
TUBB3-213ENST00000557262 RHBDL2Q9NX52 303 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 CSMD3Q7Z407 3707 aa12.01□□□□□ -0.49
TUBB3-213ENST00000557262 C2orf70A6NJV1 201 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 CRYGCP07315 174 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 FOLR2P14207 255 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 SDC2P34741 201 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 GPHB5Q86YW7 130 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 BEST4Q8NFU0 473 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 FANCD2OSQ96PS1 177 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 AIFM2Q9BRQ8 373 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 PLEKHA3Q9HB20 300 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 CCL28Q9NRJ3 127 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 TECRQ9NZ01 308 aaKnown RBP12□□□□□ -0.49
TUBB3-213ENST00000557262 CEPT1Q9Y6K0 416 aa12□□□□□ -0.49
TUBB3-213ENST00000557262 TRAV18A0A075B6X5 111 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 A0A1B0GW64 132 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 NDUFB8O95169 186 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 DHFRP00374 187 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
TUBB3-213ENST00000557262 CD7P09564 240 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
TUBB3-213ENST00000557262 PSMB6P28072 239 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 FCGR2CP31995 323 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 SCAND1P57086 179 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 ARPC4P59998 168 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 RPL8P62917 257 aaKnown RBP11.99□□□□□ -0.49
TUBB3-213ENST00000557262 MSMO1Q15800 293 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 CLEC19AQ6UXS0 136 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 ZBTB34Q8NCN2 500 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 SECTM1Q8WVN6 248 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 GPHA2Q96T91 129 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 KLK9Q9UKQ9 250 aa11.99□□□□□ -0.49
TUBB3-213ENST00000557262 CLEC2LP0C7M8 214 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 AREGP15514 252 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 CBLN1P23435 193 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 ARL3P36405 182 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 MXD1Q05195 221 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 GUCA2BQ16661 112 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 FAM106AQ4KMX7 169 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 HOGA1Q86XE5 327 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 DEFB125Q8N687 156 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 OR5H6Q8NGV6 325 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 OR4A5Q8NH83 315 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 Q9H521 79 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 ZC4H2Q9NQZ6 224 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 BET1LQ9NYM9 111 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
TUBB3-213ENST00000557262 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
TUBB3-213ENST00000557262 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
TUBB3-213ENST00000557262 A6NJ64 397 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 OR11H12B2RN74 326 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 TNFSF12O43508 249 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 IGHV3-23P01764 117 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
TUBB3-213ENST00000557262 PTHLHP12272 177 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 DEFA4P12838 97 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 CTRB1P17538 263 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 HLA-GP17693 338 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 EDN2P20800 178 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 IDNKQ5T6J7 187 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 CTRB2Q6GPI1 263 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 SPAG16Q8N0X2 631 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms