RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR6Q1Q8NGQ2 317 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 DCUN1D4Q92564 292 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 BORCS5Q969J3 196 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 USMG5Q96IX5 58 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 B9D2Q9BPU9 175 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 COA4Q9NYJ1 87 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 ELF5Q9UKW6 265 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 SPATA2Q9UM82 520 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 FBXO7Q9Y3I1 522 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 IGKV1D-8A0A087WSZ0 117 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 SMIM31A0A1B0GVY4 71 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 DPPA5A6NC42 116 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 MSGN1A6NI15 193 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 HRASP01112 189 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 PTTG1IPP53801 180 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 PJVKQ0ZLH3 352 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 PRSS8Q16651 343 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF66Q6ZN08 573 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 SLC25A42Q86VD7 318 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 MMD2Q8IY49 270 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 OR4S2Q8NH73 311 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 TCTEX1D2Q8WW35 142 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 DLX4Q92988 240 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 ALX4Q9H161 411 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 IFT46Q9NQC8 304 aa5.67□□□□□ -1.5
SCFD1-222ENST00000556768 RBMX2Q9Y388 322 aaKnown RBP5.67□□□□□ -1.5
SCFD1-222ENST00000556768 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
SCFD1-222ENST00000556768 DHFRP00374 187 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 IGLV2-23P01705 113 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 FCGR2CP31995 323 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 KIR2DS2P43631 304 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 CDK10Q15131 360 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 IDO2Q6ZQW0 420 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 ANKRD13BQ86YJ7 626 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 SECTM1Q8WVN6 248 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 TAS2R8Q9NYW2 309 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 FAM30AQ9NZY2 134 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 SMAD5-AS1Q9Y6J3 95 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
SCFD1-222ENST00000556768 IGHV4OR15-8A0A075B7B6 117 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 A0A087WW49 117 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 LINC00473A8K010 186 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 XRCC3O43542 346 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR2A4O95047 310 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 BRI3O95415 125 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 CRYGBP07316 175 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR9G9P0C7N8 305 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 APELAP0DMC3 54 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 SLURP1P55000 103 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 CATR1Q13166 79 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 GAGE13Q4V321 117 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR2B11Q5JQS5 317 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 TMEM69Q5SWH9 247 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 ACSM6Q6P461 480 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 HOGA1Q86XE5 327 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR5AP2Q8NGF4 316 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR5H6Q8NGV6 325 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 CD300LFQ8TDQ1 290 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 SRSF12Q8WXF0 261 aaKnown RBP5.65□□□□□ -1.5
SCFD1-222ENST00000556768 DDB2Q92466 427 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 SNAPC3Q92966 411 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 OR2A7Q96R45 310 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 PRR25Q96S07 402 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 RNF167Q9H6Y7 350 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 AUNIPQ9H7T9 357 aa5.65□□□□□ -1.5
SCFD1-222ENST00000556768 PEF1Q9UBV8 284 aaKnown RBP5.65□□□□□ -1.5
SCFD1-222ENST00000556768 FAM223BA6NKX1 122 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SSX5O60225 188 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 PPYP01298 95 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SAA1P0DJI8 122 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-222ENST00000556768 DEFA4P12838 97 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 S100GP29377 79 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 MAS1LP35410 378 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 HERV-K104P61576 105 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 LSM3P62310 102 aaKnown RBP5.64□□□□□ -1.51
SCFD1-222ENST00000556768 ATP5G2Q06055 141 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 MSMO1Q15800 293 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 RPEL1Q2QD12 228 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 UBE2NLQ5JXB2 153 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 FAM223AQ8IWN6 122 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 CMTM1Q8IZ96 169 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 GVQW1Q8N7I0 195 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SAMD12Q8N8I0 201 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 OR13F1Q8NGS4 319 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SLC5A7Q9GZV3 580 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF430Q9H8G1 570 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-222ENST00000556768 H0Y980 276 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 CYB5BO43169 146 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 PRSS3P35030 304 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 RPS19P39019 145 aaKnown RBP5.64□□□□□ -1.51
SCFD1-222ENST00000556768 TAS2R46P59540 309 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 FXYD4P59646 89 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 ASPHD1Q5U4P2 390 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SPAG16Q8N0X2 631 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 NECAP1Q8NC96 275 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 OR6F1Q8NGZ6 308 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 GIMAP1Q8WWP7 306 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 SLC25A38Q96DW6 304 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms