RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GPHA2Q96T91 129 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 SPATA25Q9BR10 227 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 RNF167Q9H6Y7 350 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 ZNF257Q9Y2Q1 563 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 FCGR2CP31995 323 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 IDNKQ5T6J7 187 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 ZNF773Q6PK81 442 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 ADAMTSL5Q6ZMM2 481 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 BEST4Q8NFU0 473 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 KCTD12Q96CX2 325 aaKnown RBP17.13■□□□□ 0.33
ACTN1-220ENST00000556433 CCL28Q9NRJ3 127 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 SLC2A9Q9NRM0 540 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 FBXL7Q9UJT9 491 aa17.13■□□□□ 0.33
ACTN1-220ENST00000556433 LOC100506127A0A0U1RQW1 187 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 PPP5D1E7EU14 171 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 E7EUB6 86 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 HRASP01112 189 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 PTHLHP12272 177 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 MAS1LP35410 378 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 CD300EQ496F6 205 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-220ENST00000556433 FAM209BQ5JX69 171 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 ZFAND6Q6FIF0 208 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 C19orf35Q6ZS72 473 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 SSX9Q7RTT3 188 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 GVQW1Q8N7I0 195 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 SECTM1Q8WVN6 248 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 ISOC1Q96CN7 298 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 EDA2RQ9HAV5 297 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 ETV7Q9Y603 341 aa17.12■□□□□ 0.33
ACTN1-220ENST00000556433 DYNC2H1Q8NCM8 4307 aaKnown RBP17.12■□□□□ 0.33
ACTN1-220ENST00000556433 NPIPB5A8MRT5 1133 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 TNFSF12O43508 249 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 GGCTO75223 188 aaKnown RBP17.11■□□□□ 0.33
ACTN1-220ENST00000556433 HLA-AP01891 365 aaKnown RBP17.11■□□□□ 0.33
ACTN1-220ENST00000556433 ZNF735P0CB33 412 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 KIR2DS2P43631 304 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 SCAND1P57086 179 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 HOGA1Q86XE5 327 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 DYNLRB2Q8TF09 96 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 SLC25A38Q96DW6 304 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 DMRT1Q9Y5R6 373 aa17.11■□□□□ 0.33
ACTN1-220ENST00000556433 A0A1B0GW64 132 aa17.1■□□□□ 0.33
ACTN1-220ENST00000556433 NDUFB8O95169 186 aa17.1■□□□□ 0.33
ACTN1-220ENST00000556433 OR2C1O95371 312 aa17.1■□□□□ 0.33
ACTN1-220ENST00000556433 TENM2Q9NT68 2774 aa17.1■□□□□ 0.33
ACTN1-220ENST00000556433 ZNF785A8K8V0 405 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 IGHV3-23P01764 117 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 IFNA6P05013 189 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 FCER2P06734 321 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 CRYGCP07315 174 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 AREGP15514 252 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 PSMB6P28072 239 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 CD81P60033 236 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 RPL8P62917 257 aaKnown RBP17.09■□□□□ 0.33
ACTN1-220ENST00000556433 MSMO1Q15800 293 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 DEFB114Q30KQ6 69 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 SPAG16Q8N0X2 631 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 ZBTB34Q8NCN2 500 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 OR13F1Q8NGS4 319 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 FANCD2OSQ96PS1 177 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 PLEKHA3Q9HB20 300 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 DIABLOQ9NR28 239 aa17.09■□□□□ 0.33
ACTN1-220ENST00000556433 A0A0A6YYH2 397 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 A6NJ64 397 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 C2orf70A6NJV1 201 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 TPPPO94811 219 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 DHFRP00374 187 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 PPYP01298 95 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 FOLR2P14207 255 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 MYOD1P15172 320 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 HLA-GP17693 338 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 LAX1Q8IWV1 398 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 NEURL2Q9BR09 285 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 AIFM2Q9BRQ8 373 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 SLC5A7Q9GZV3 580 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 AUNIPQ9H7T9 357 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 SLC2A8Q9NY64 477 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 S4R3C0 116 aa17.08■□□□□ 0.32
ACTN1-220ENST00000556433 EDN2P20800 178 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 NEDD8Q15843 81 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 OR4A47Q6IF82 309 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 CLEC19AQ6UXS0 136 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 GPHB5Q86YW7 130 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 OR4A5Q8NH83 315 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 HRASLSQ9HDD0 168 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 BET1LQ9NYM9 111 aa17.07■□□□□ 0.32
ACTN1-220ENST00000556433 LGALS9O00182 355 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 SULT1C2O00338 296 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 REG1AP05451 166 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 CD7P09564 240 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 DEFA4P12838 97 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 HIST1H1BP16401 226 aaKnown RBP17.06■□□□□ 0.32
ACTN1-220ENST00000556433 CTRB1P17538 263 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 ARL3P36405 182 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 FXYD4P59646 89 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 GUCA2BQ16661 112 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 TIMM50Q3ZCQ8 353 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 CTRB2Q6GPI1 263 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 EEF1AKMT3Q96AZ1 226 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 GAR1Q9NY12 217 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms