RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NEK7Q8TDX7 302 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 DYNLRB2Q8TF09 96 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GHSRQ92847 366 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 LGALS12Q96DT0 336 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 YPEL2Q96QA6 119 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 CLCC1Q96S66 551 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GPER1Q99527 375 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GABARAPL3Q9BY60 117 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 NXF2Q9GZY0 626 aaKnown RBP3.58□□□□□ -1.84
ATXN3-239ENST00000556315 METTL9Q9H1A3 318 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 WFDC10AQ9H1F0 79 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ZC4H2Q9NQZ6 224 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 RHBDL2Q9NX52 303 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 CCDC59Q9P031 241 aaKnown RBP3.58□□□□□ -1.84
ATXN3-239ENST00000556315 METTL1Q9UBP6 276 aaKnown RBP3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GNG8Q9UK08 70 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 TRAPPC2LQ9UL33 140 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ING4Q9UNL4 249 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GAB2Q9UQC2 676 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
ATXN3-239ENST00000556315 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR5H14A6NHG9 310 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR4C45A6NMZ5 311 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 H7C2Y5 167 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 GABRPO00591 440 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 GEMIN2O14893 280 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF780AO75290 641 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CA11O75493 328 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CA2P00918 260 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 TRBV12-3P01733 135 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 HTR1AP08908 422 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CT45A6P0DMU7 189 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CT45A5P0DMU8 189 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CT45A7P0DMV0 189 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 FOLR2P14207 255 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 RAB3AP20336 220 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 EPHA2P29317 976 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 POLR2IP36954 125 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ETV6P41212 452 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR3A3P47888 321 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 LGALS7P47929 136 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 APOC4P55056 127 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 RBM11P57052 281 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 HTD2P86397 168 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF85Q03923 595 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PSG5Q15238 335 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 MPV17LQ2QL34 196 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 KIAA2026Q5HYC2 2103 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 SIGIRRQ6IA17 410 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 FAM71F2Q6NXP2 309 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 FAM122CQ6P4D5 195 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 GLDNQ6ZMI3 551 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PQLC2Q6ZP29 291 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 HS3ST5Q8IZT8 346 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 GAPTQ8N292 157 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR51A4Q8NGJ6 313 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR52B4Q8NGK2 314 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 OR4K15Q8NH41 348 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 SETD6Q8TBK2 473 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 THRSPQ92748 146 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 RRNAD1Q96FB5 475 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF479Q96JC4 524 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 IL4I1Q96RQ9 567 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 S100A13Q99584 98 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
ATXN3-239ENST00000556315 TAF9BQ9HBM6 251 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ACOT13Q9NPJ3 140 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 FKBP14Q9NWM8 211 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 IL36GQ9NZH8 169 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 KCNIP1Q9NZI2 227 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PIPOXQ9P0Z9 390 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 DAPK2Q9UIK4 370 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 JPT1Q9UK76 154 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 PEX16Q9Y5Y5 336 aa3.57□□□□□ -1.84
ATXN3-239ENST00000556315 DSCAML1Q8TD84 2053 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 A0A075B6Q4 140 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 SAA2-SAA4A0A096LPE2 208 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 KIR2DL5BA0A0G2JN68 375 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 KIR2DL5BA0A0G2JPC4 375 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 hDV102S1A0JD36 115 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 EFCAB10A6NFE3 127 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 C2orf70A6NJV1 201 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 PTGES3LE9PB15 166 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 H0YJW9 148 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 VCYO14598 125 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 RAB29O14966 203 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms