RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 C1QL4Q86Z23 238 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 SIGLECL1Q8N7X8 197 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 C15orf54Q8N8G6 183 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 MRGPRDQ8TDS7 321 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 TMEM147Q9BVK8 224 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 FAM234AQ9H0X4 552 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 SAP30LQ9HAJ7 183 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 MSL2Q9HCI7 577 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-216ENST00000554975 UFSP2Q9NUQ7 469 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 PRELID3BQ9Y3B1 194 aa9.1□□□□□ -0.95
SHMT2-216ENST00000554975 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ODAMA1E959 279 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 NKX6-3A6NJ46 265 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 AGPAT2O15120 278 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ZNF737O75373 536 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 IGKV1-39P01597 117 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 MBP02144 154 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 IGKV1D-39P04432 117 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 HSPB1P04792 205 aaKnown RBP9.09□□□□□ -0.95
SHMT2-216ENST00000554975 IRF2P14316 349 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 MDKP21741 143 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-216ENST00000554975 GPR12P47775 334 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 PAX9P55771 341 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 RPP30P78346 268 aaKnown RBP9.09□□□□□ -0.95
SHMT2-216ENST00000554975 AESQ08117 197 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 HFEQ30201 348 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ZNF585BQ52M93 769 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 KHDC3LQ587J8 217 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ZNF826PQ6ZT77 177 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ZNF561Q8N587 486 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 TMEM217Q8N7C4 229 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 OR10G4Q8NGN3 311 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 BSCL2Q96G97 398 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-216ENST00000554975 ADTRPQ96IZ2 230 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 AIFM2Q9BRQ8 373 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 EGLN1Q9GZT9 426 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 KCNIP2Q9NS61 270 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 GNG12Q9UBI6 72 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 MLXQ9UH92 298 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
SHMT2-216ENST00000554975 F2RL2O00254 374 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 IGHV1-46P01743 117 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 P0C879 139 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 CTRB1P17538 263 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 PRTN3P24158 256 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 NPBWR1P48145 328 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 CEBPDP49716 269 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-216ENST00000554975 UBE2KP61086 200 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
SHMT2-216ENST00000554975 TNFAIP6P98066 277 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-216ENST00000554975 SLC38A11Q08AI6 406 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 TMEM267Q0VDI3 215 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-216ENST00000554975 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-216ENST00000554975 SOHLH1Q5JUK2 328 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 ZNF506Q5JVG8 444 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 CTRB2Q6GPI1 263 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 FGFRL1Q8N441 504 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 Q8TCH9 128 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 TIMD4Q96H15 378 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 OR2V2Q96R30 315 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 ZNF665Q9H7R5 613 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 RNF7Q9UBF6 113 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 IL19Q9UHD0 177 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 GAB2Q9UQC2 676 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 FBXO7Q9Y3I1 522 aa9.08□□□□□ -0.96
SHMT2-216ENST00000554975 TRGV10A0A0A0MS01 117 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 TRAV39A0A0B4J263 110 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 RBFOX3A6NFN3 312 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 LRRC30A6NM36 301 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 C17orf112F2Z3M2 114 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 H3BP45 60 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 C15orf65H3BRN8 121 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 TMEM50AO95807 157 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 HPRT1P00492 218 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 IAPPP10997 89 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 FOLR2P14207 255 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 TNFRSF1AP19438 455 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 PPP1CCP36873 323 aaKnown RBP9.07□□□□□ -0.96
SHMT2-216ENST00000554975 SRSF3P84103 164 aaKnown RBP9.07□□□□□ -0.96
SHMT2-216ENST00000554975 EDDM3AQ14507 147 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 LRRC75BQ2VPJ9 315 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 Q3ZCU0 254 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 TMEM41BQ5BJD5 291 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 TMEM14EPQ6UXP3 125 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 BCL6BQ8N143 479 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-216ENST00000554975 OR52L2PQ8NGH6 319 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 OR13A1Q8NGR1 328 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 OR4S2Q8NH73 311 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 NANPQ8TBE9 248 aa9.07□□□□□ -0.96
SHMT2-216ENST00000554975 CCL17Q92583 94 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms