RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 DCXRQ7Z4W1 244 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 LRRC28Q86X40 367 aaPredicted RBP1.28□□□□□ -2.2
SCFD1-213ENST00000554776 SLC22A24Q8N4F4 322 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 DEFB125Q8N687 156 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 PPP1R14BQ96C90 147 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 Q9BRP9 147 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TMEM222Q9H0R3 208 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 CXCL16Q9H2A7 254 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TMEM106BQ9NUM4 274 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 PAQR5Q9NXK6 330 aaPredicted RBP1.28□□□□□ -2.2
SCFD1-213ENST00000554776 RPL26L1Q9UNX3 145 aaKnown RBP1.28□□□□□ -2.2
SCFD1-213ENST00000554776 ANGPT4Q9Y264 503 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 PKIGQ9Y2B9 76 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 FAM215AQ9Y5M1 114 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 MYO3BQ8WXR4 1341 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 PXDNLA1KZ92 1463 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 VWDEQ8N2E2 1590 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 TMSB15BA0A087X1C1 80 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 IGHV1-69-2A0A0G2JMI3 117 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 ARRDC5A6NEK1 342 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 DCTN3O75935 186 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 PPBPP02775 128 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 HIST1H1EP10412 219 aaKnown RBP1.27□□□□□ -2.21
SCFD1-213ENST00000554776 IFI30P13284 250 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 RAP1GDS1P52306 607 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 DEFA1P59665 94 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 SPCS3P61009 180 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 FKBP1AP62942 108 aaKnown RBP1.27□□□□□ -2.21
SCFD1-213ENST00000554776 ERHP84090 104 aaKnown RBP1.27□□□□□ -2.21
SCFD1-213ENST00000554776 IFITM2Q01629 132 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF90Q03938 601 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 CCDC122Q5T0U0 273 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 SSX8Q7RTT4 187 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 TBC1D19Q8N5T2 526 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 TMEM86BQ8N661 226 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 Q8NDZ9 215 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 OR1M1Q8NGA1 313 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 OR5J2Q8NH18 312 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 OPTNQ96CV9 577 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 TMA16Q96EY4 203 aaKnown RBP1.27□□□□□ -2.21
SCFD1-213ENST00000554776 CCDC42Q96M95 316 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 TIMM21Q9BVV7 248 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 FAM96AQ9H5X1 160 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 NDUFB11Q9NX14 153 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 NAT8Q9UHE5 227 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 HHLA3Q9XRX5 114 aa1.27□□□□□ -2.21
SCFD1-213ENST00000554776 LSM5Q9Y4Y9 91 aaKnown RBP1.27□□□□□ -2.21
SCFD1-213ENST00000554776 PLXNA3P51805 1871 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 KDM5BQ9UGL1 1544 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 SNAPC4Q5SXM2 1469 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 TRAV41A0A0B4J266 112 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 EEF1E1-BLOC1S5C9J1V9 151 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 LY6LH3BQJ8 138 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 M0R036 132 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 KLRC4O43908 158 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 IGKV1-16P04430 117 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 FAM228BP0C875 321 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 FGF6P10767 208 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 S100A7P31151 101 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 RPL28P46779 137 aaKnown RBP1.26□□□□□ -2.21
SCFD1-213ENST00000554776 CSN1S1P47710 185 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 OR4D2P58180 307 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 FXYD7P58549 80 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 RAB5BP61020 215 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 SLC38A11Q08AI6 406 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 OR2F1Q13607 317 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 PMAIP1Q13794 54 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 IMPG1Q17R60 797 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF791Q3KP31 576 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF705AQ6ZN79 300 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-213ENST00000554776 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 DCANP1Q8TF63 244 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 ANKRD7Q92527 254 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 SLC35B4Q969S0 331 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 CNBD2Q96M20 576 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 ERMAPQ96PL5 475 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-213ENST00000554776 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 TIMM22Q9Y584 194 aa1.26□□□□□ -2.21
SCFD1-213ENST00000554776 DENND4BO75064 1496 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 GBF1Q92538 1859 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 A0A0J9YY10 115 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 A0A1B0GX78 115 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 GGT3PA6NGU5 568 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 LEPROTO15243 131 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 IFNA16P05015 189 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 LGALS1P09382 135 aaKnown RBP1.25□□□□□ -2.21
SCFD1-213ENST00000554776 UCHL1P09936 223 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 CCL5P13501 91 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 CD24P25063 80 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 HLA-DMBP28068 263 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 TPI1P60174 286 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 TMEM258P61165 79 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 AP1S1P61966 158 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 MIAQ16674 131 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 GUK1Q16774 197 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 ZNF565Q8N9K5 539 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 SPACA4Q8TDM5 124 aa1.25□□□□□ -2.21
SCFD1-213ENST00000554776 PPP1R2P1Q96PQ5 205 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms