RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ARR3P36575 388 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 CARD18P57730 90 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 RANP62826 216 aaKnown RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 RPP30P78346 268 aaKnown RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 BSXQ3C1V8 233 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 PIGYQ3MUY2 71 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 COX19Q49B96 90 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 TSPO2Q5TGU0 170 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 SPINK14Q6IE38 97 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF880Q6PDB4 577 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 FIP1L1Q6UN15 594 aaKnown RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 BTNL3Q6UXE8 466 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF818PQ6ZRF7 136 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 GAPTQ8N292 157 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZIC4Q8N9L1 334 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 OR1P1Q8NH06 330 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 PLPPR1Q8TBJ4 325 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM170AQ8WVE7 144 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 PIGCQ92535 297 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 BSCL2Q96G97 398 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF845Q96IR2 970 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF385AQ96PM9 386 aaKnown RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 HIST1H2BLQ99880 126 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 SMIM7Q9BQ49 75 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM204Q9BSN7 226 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 HES7Q9BYE0 225 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 MAP1LC3BQ9GZQ8 125 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 OR51I2Q9H344 312 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 GNG13Q9P2W3 67 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 EML6Q6ZMW3 1958 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 TGIF2-C20orf24A0A0A6YYL0 155 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 IGKV1-12A0A0C4DH73 117 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 FAM90A9PA6NNJ1 464 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF716A6NP11 495 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ANKRD30BLA7E2S9 258 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 KLRC4-KLRK1H3BQV0 150 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PHOX2AO14813 284 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZIC3O60481 467 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CYTIPO60759 359 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF737O75373 536 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 NEURL1O76050 574 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CST7O76096 145 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 SYNGR4O95473 234 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 IGKV1D-12P01611 117 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 P04436 131 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 SOD3P08294 240 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MMP7P09237 267 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 FABP4P15090 132 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 COX5AP20674 150 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 OMGP23515 440 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 IL2RGP31785 369 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PRRC2AP48634 2157 aaKnown RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CYB561P49447 251 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PAX9P55771 341 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MLF1P58340 268 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 GNG3P63215 75 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CCL20P78556 96 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PSG4Q00888 419 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF154Q13106 437 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CATR1Q13166 79 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PHYHD1Q5SRE7 291 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 WDR25Q64LD2 544 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF774Q6NX45 483 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MRPL21Q7Z2W9 205 aaKnown RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF525Q8N782 197 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 OR10V1Q8NGI7 309 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 OR11L1Q8NGX0 322 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 OR2T10Q8NGZ9 312 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 NEK7Q8TDX7 302 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 FRZBQ92765 325 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 RAB1CQ92928 201 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 LHX4Q969G2 390 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 R3HDM4Q96D70 268 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM147Q9BVK8 224 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 MRPL37Q9BZE1 423 aaKnown RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 WDR61Q9GZS3 305 aaKnown RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 WNT5BQ9H1J7 359 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 CRLF2Q9HC73 371 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 RPRMQ9NS64 109 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 SLC39A9Q9NUM3 307 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 PSENENQ9NZ42 101 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 TAAR3PQ9P1P4 343 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 B4GALT7Q9UBV7 327 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 POLDIP2Q9Y2S7 368 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 KLF13Q9Y2Y9 288 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-203ENST00000554264 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
VPS33B-203ENST00000554264 ALPK2Q86TB3 2170 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 A0A0J9YW62 118 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ZFP92A6NM28 416 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 CEBPZOSA8MTT3 80 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 A8MWP6 167 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 OVOL3O00110 214 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 ZNHIT1O43257 154 aa4.92□□□□□ -1.62
VPS33B-203ENST00000554264 SS18L1O75177 396 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms