RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PDCD6O75340 191 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 DHRS3O75911 302 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 STAG3L2P0CL84 134 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 FGF6P10767 208 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 PSG2P11465 335 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 PRR22Q8IZ63 422 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 LMX1AQ8TE12 382 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 WIPF2Q8TF74 440 aaPredicted RBP7.98□□□□□ -1.13
SIX4-202ENST00000554079 CLDN23Q96B33 292 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 GALMQ96C23 342 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SPAG8Q99932 426 aaPredicted RBP7.98□□□□□ -1.13
SIX4-202ENST00000554079 TMEM204Q9BSN7 226 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SAP30LQ9HAJ7 183 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 CLCF1Q9UBD9 225 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 ZNF257Q9Y2Q1 563 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 OR2W1Q9Y3N9 320 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1-27A0A075B6S5 117 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 H0YIG0 161 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 HBZP02008 142 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 PRNPP04156 253 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 GP1BBP13224 206 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 IL12BP29460 328 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 GNG4P50150 75 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 IGLV3-21P80748 117 aaPredicted RBP7.97□□□□□ -1.13
SIX4-202ENST00000554079 FUT7Q11130 342 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 VWC2Q2TAL6 325 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 LHX8Q68G74 356 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 SLC25A47Q6Q0C1 308 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 TMEM251Q8N6I4 163 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 STPG3Q8N7X2 389 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 ELSPBP1Q96BH3 223 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 ABHD17AQ96GS6 310 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 MS4A5Q9H3V2 200 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 OSTCQ9NRP0 149 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 YTHDF2Q9Y5A9 579 aaKnown RBP7.97□□□□□ -1.13
SIX4-202ENST00000554079 HILPDAQ9Y5L2 63 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 C2orf16Q68DN1 1984 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 SPAG17Q6Q759 2223 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
SIX4-202ENST00000554079 TRAV38-1A0A0B4J264 116 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 A0A0J9YY10 115 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 A0A1B0GX78 115 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 J3QR89 54 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 RRHO14718 337 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 RER1O15258 196 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 OR7C1O76099 320 aaPredicted RBP7.96□□□□□ -1.13
SIX4-202ENST00000554079 EML2O95834 649 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 APOA2P02652 100 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 FABP2P12104 132 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 FABP6P51161 128 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 TCL1AP56279 114 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 RPL31P62899 125 aaKnown RBP7.96□□□□□ -1.13
SIX4-202ENST00000554079 DAZAP2Q15038 168 aaPredicted RBP7.96□□□□□ -1.13
SIX4-202ENST00000554079 C5orf30Q96GV9 206 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 C19orf25Q9UFG5 118 aaPredicted RBP7.96□□□□□ -1.13
SIX4-202ENST00000554079 TRAPPC2LQ9UL33 140 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 CCL26Q9Y258 94 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 PIGLQ9Y2B2 252 aa7.96□□□□□ -1.13
SIX4-202ENST00000554079 PRRC2BQ5JSZ5 2229 aaKnown RBP7.96□□□□□ -1.13
SIX4-202ENST00000554079 KIAA0100Q14667 2235 aaKnown RBP7.96□□□□□ -1.14
SIX4-202ENST00000554079 PIGBOS1A0A0B4J2F0 54 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 IGKV1-12A0A0C4DH73 117 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 IZUMO1RA6ND01 250 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 LRRC30A6NM36 301 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 H0Y8G0 127 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 H3BMH7 237 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 OR2J3O76001 311 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 IGKV1D-12P01611 117 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 ARL14EPLP0DKL9 152 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 GCSAMLQ5JQS6 135 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 GDF5OSQ5U4N7 250 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 GCSAMQ8N6F7 178 aa7.96□□□□□ -1.14
SIX4-202ENST00000554079 MKI67P46013 3256 aaKnown RBP7.96□□□□□ -1.14
SIX4-202ENST00000554079 IGHV1-24A0A0C4DH33 117 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 CLEC3BP05452 202 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 GRB2P62993 217 aaKnown RBP7.95□□□□□ -1.14
SIX4-202ENST00000554079 CCL7P80098 99 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 FXYD3Q14802 87 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 OSR2Q8N2R0 312 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 OR10D3Q8NH80 312 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 H1FXQ92522 213 aaKnown RBP7.95□□□□□ -1.14
SIX4-202ENST00000554079 IRF7Q92985 503 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
SIX4-202ENST00000554079 IGKV1-6A0A0C4DH72 117 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 A0A1B0GW15 77 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 ZNF716A6NP11 495 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 FAM90A26D6RGX4 464 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 SCTP09683 121 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 CDAP32320 146 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 RPL8P62917 257 aaKnown RBP7.95□□□□□ -1.14
SIX4-202ENST00000554079 ATP5G2Q06055 141 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 AESQ08117 197 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 MALLQ13021 153 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 PDCD1Q15116 288 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 CR1LQ2VPA4 569 aa7.95□□□□□ -1.14
SIX4-202ENST00000554079 WDR74Q6RFH5 385 aaPredicted RBP7.95□□□□□ -1.14
SIX4-202ENST00000554079 RASL11AQ6T310 242 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms