RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PSMB6P28072 239 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 G6PCP35575 357 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
SHMT2-208ENST00000553868 LINC00205P59089 165 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 PPP1R1CQ8WVI7 109 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
SHMT2-208ENST00000553868 MALSU1Q96EH3 234 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 COA4Q9NYJ1 87 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 NPFFO15130 113 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 SHOXO15266 292 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 PDZD9Q8IXQ8 264 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 SIGLECL1Q8N7X8 197 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 VSTM2AQ8TAG5 236 aa11.62□□□□□ -0.55
SHMT2-208ENST00000553868 IGHV1-69DA0A0B4J2H0 117 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 A0A1W2PRD5 423 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 A0A1W2PRF3 423 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 A0A1W2PRM7 423 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 IGHV1-69P01742 117 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 CD1BP29016 333 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 NKX2-1P43699 371 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-208ENST00000553868 LGALS7P47929 136 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 S100A10P60903 97 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 IL15RAQ13261 267 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 LRRC37A5PQ49AS3 106 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 TEX29Q8N6K0 151 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 OR4D5Q8NGN0 318 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 RHOVQ96L33 236 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 RNF5Q99942 180 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-208ENST00000553868 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
SHMT2-208ENST00000553868 CENPVL3A0A0U1RRI6 287 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 DNAJC9-AS1A6NH13 148 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 WRBO00258 174 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 RBMXL2O75526 392 aaKnown RBP11.6□□□□□ -0.55
SHMT2-208ENST00000553868 MPC2O95563 127 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 P0C879 139 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 SLC25A4P12235 298 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 PVALBP20472 110 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-208ENST00000553868 BRS3P32247 399 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 SAA4P35542 130 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 BPIFB3P59826 476 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 RPS16P62249 146 aaKnown RBP11.6□□□□□ -0.55
SHMT2-208ENST00000553868 RAB32Q13637 225 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 C11orf87Q6NUJ2 197 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 LHFPL4Q7Z7J7 247 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 TSNAXQ99598 290 aaKnown RBP11.6□□□□□ -0.55
SHMT2-208ENST00000553868 MS4A7Q9GZW8 240 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-208ENST00000553868 TMEM140Q9NV12 185 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
SHMT2-208ENST00000553868 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 FXYD6-FXYD2A0A087WZ82 144 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 HMSDA8MTL9 139 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 TIMM23O14925 209 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 PITX3O75364 302 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 MED6O75586 246 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 C4BPBP20851 252 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 NUP62P37198 522 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-208ENST00000553868 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-208ENST00000553868 SSX2Q16385 188 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 PRSS54Q6PEW0 395 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 TMEM65Q6PI78 240 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 SSX9Q7RTT3 188 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 OR4A5Q8NH83 315 aa11.59□□□□□ -0.55
SHMT2-208ENST00000553868 WDR89Q96FK6 387 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-208ENST00000553868 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 IGHV3-72A0A0B4J1Y9 119 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 K7EPK0 472 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 LY86O95711 162 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 MBPP02686 304 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-208ENST00000553868 ID3Q02535 119 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 OR4A47Q6IF82 309 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 FOXRED2Q8IWF2 684 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 FAM71E2Q8N5Q1 922 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 FKBP11Q9NYL4 201 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 MBD2Q9UBB5 411 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 PRNDQ9UKY0 176 aa11.58□□□□□ -0.56
SHMT2-208ENST00000553868 LSM5Q9Y4Y9 91 aaKnown RBP11.58□□□□□ -0.56
SHMT2-208ENST00000553868 ARHGAP32A7KAX9 2087 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 E5RGE8 158 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms