RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 OR51G1Q8NGK1 321 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 RELBQ01201 579 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 COX6B1P14854 86 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 LOXL3P58215 753 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 WFDC3Q8IUB2 231 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
ARHGEF40-202ENST00000553709 TMEM177Q53S58 311 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 NPIPB7O75200 414 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 GCHFRP30047 84 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 SLC25A28Q96A46 364 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 MRPL32Q9BYC8 188 aaKnown RBP13□□□□□ -0.33
ARHGEF40-202ENST00000553709 AP5S1Q9NUS5 200 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 LNP1A1A4G5 178 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 KLF7O75840 302 aaPredicted RBP13□□□□□ -0.33
ARHGEF40-202ENST00000553709 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.332e-6■□□□□ 8.7
ARHGEF40-202ENST00000553709 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 FDCSPQ8NFU4 85 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 SFRP2Q96HF1 295 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 PSMB2P49721 201 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
ARHGEF40-202ENST00000553709 CIDEAO60543 219 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 RTN4RQ9BZR6 473 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 ICE1Q9Y2F5 2266 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 FCGR2BP31994 310 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 MFAP4P55083 255 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 PMCHL1Q16048 86 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 SPATA45Q537H7 98 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 VENTXO95231 258 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 GLRXP35754 106 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 GATAD1Q8WUU5 269 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 PGLYRP4Q96LB8 373 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 RNF115Q9Y4L5 304 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 REG1AP05451 166 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 CECR9P0C854 216 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
ARHGEF40-202ENST00000553709 ANAPC1Q9H1A4 1944 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 CA2P00918 260 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 UMODP07911 640 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 RNF224P0DH78 156 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 DDTP30046 118 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 SRIP30626 198 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 TRAV30A0A087WSZ9 112 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 C5orf52A6NGY3 159 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 TIMM23BQ5SRD1 257 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 GUCD1Q96NT3 240 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 METTL26Q96S19 204 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 EGR1P18146 543 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 CKS2P33552 79 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 NMUP48645 174 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 UNQ5815/PRO19632Q6UWF5 114 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 GFI1Q99684 422 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 LEPROTL1O95214 131 aa12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 MRPS18CQ9Y3D5 142 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-202ENST00000553709 CCL1P22362 96 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 MAS1LP35410 378 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 IGKV1-9A0A0C4DH69 117 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 PQLC2LA1A4F0 135 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 ATXN7O15265 892 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 IL6RP08887 468 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 IGLV3-32A0A0A0MS00 114 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 RRHO14718 337 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 GDF9O60383 454 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 SRP19P09132 144 aaKnown RBP12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 DLX1P56177 255 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 ABLIM2Q6H8Q1 611 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 BIVMQ86UB2 503 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 IGHV1-69-2A0A0G2JMI3 117 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 CYB5R2Q6BCY4 276 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
ARHGEF40-202ENST00000553709 OR4C46A6NHA9 309 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 ARF6P62330 175 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 CSRP2Q16527 193 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 KIAA1644Q3SXP7 199 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 SPOCK3Q9BQ16 436 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 TMEM56-RWDD3S4R434 201 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 C1orf162Q8NEQ5 155 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 ZDBF2Q9HCK1 2354 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 CENPWQ5EE01 88 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
ARHGEF40-202ENST00000553709 PSG9Q00887 426 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 PSG7Q13046 419 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms