RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 CDK5Q00535 292 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF146Q15072 292 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TATDN3Q17R31 274 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 C5orf64Q2M2E5 130 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TTC23Q5W5X9 447 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 KDM4DQ6B0I6 523 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR8G2PQ6IF36 304 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SSX6Q7RTT6 188 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HSD17B11Q8NBQ5 300 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR10H4Q8NGA5 316 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR13A1Q8NGR1 328 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TERB2Q8NHR7 220 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 UBALD1Q8TB05 177 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 C4orf3Q8WVX3 66 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PHYHIPQ92561 330 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 COQ2Q96H96 371 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RNF2Q99496 336 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SRRQ9GZT4 340 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HIPK2Q9H2X6 1198 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GNB4Q9HAV0 340 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CALYQ9NYX4 217 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IDI2-AS1Q9NZ38 188 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR6C3Q9NZP0 311 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PSG11Q9UQ72 335 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 POMPQ9Y244 141 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 WSB1Q9Y6I7 421 aa4.3□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGKV1-9A0A0C4DH69 117 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 A0A1B0GVY2 172 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 A0A1W2PQL4 384 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FABP12A6NFH5 140 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 F5H697 171 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MPZL2O60487 215 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GABARAPO95166 117 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IFNA21P01568 189 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR8U8P0C7N1 319 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SPP1P10451 314 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GP9P14770 177 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ARSBP15848 533 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ATF1P18846 271 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 S100A2P29034 98 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SSTR5P35346 364 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RAB7AP51149 207 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GABARAPL2P60520 117 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GNB1P62873 340 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MS4A2Q01362 244 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF616Q08AN1 781 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PDZK1IP1Q13113 114 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FHL3Q13643 280 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SPANXN2Q5MJ10 180 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 RBM48Q5RL73 367 aaKnown RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 LAMTOR1Q6IAA8 161 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 Q6P435 159 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF429Q86V71 674 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SVBPQ8N300 66 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 TCEANCQ8N8B7 351 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 Q8N9W7 124 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OR2T10Q8NGZ9 312 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 HAVCR2Q8TDQ0 301 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GLMPQ8WWB7 406 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DCUN1D4Q92564 292 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 FGGYQ96C11 551 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ADAT3Q96EY9 351 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 KCTD7Q96MP8 289 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IL4I1Q96RQ9 567 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PHB2Q99623 299 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DPCDQ9BVM2 203 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SLC5A7Q9GZV3 580 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ABCG5Q9H222 651 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 VCX2Q9H322 139 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SLC25A19Q9HC21 320 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 CLN6Q9NWW5 311 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 SMPXQ9UHP9 88 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GNG8Q9UK08 70 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 DNAH5Q8TE73 4624 aa4.29□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGHV3-43A0A0B4J1X8 118 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 ZNF736B4DX44 427 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 G3V318 75 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 PDCD5O14737 125 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 OVOL1O14753 267 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 KDM4BO94953 1096 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 MOSP00540 346 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGHG4P01861 327 aa4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 GAPDHP04406 335 aaKnown RBP4.28□□□□□ -1.72
SMARCE1P3-201ENST00000553649 IGHV3-43DP0DP04 118 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms