RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ZCCHC14Q8WYQ9 949 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 RAB39BQ96DA2 213 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 RHOVQ96L33 236 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF714Q96N38 554 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 MS4A7Q9GZW8 240 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 SLC35B3Q9H1N7 401 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM14BQ9NUH8 114 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 DCAF16Q9NXF7 216 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 CISD1Q9NZ45 108 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 FOXA2Q9Y261 457 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 SAA2-SAA4A0A096LPE2 208 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TRBV23-1A0A0A0MS06 115 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 IGHV1-69-2A0A0G2JMI3 117 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 RBFOX3A6NFN3 312 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 C15orf62A8K5M9 175 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 FNDC10F2Z333 226 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 H3BP45 60 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 MPDU1O75352 247 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 C1QL1O75973 258 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 NXPH3O95157 252 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 SFTA3P0C7M3 94 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 SAA2P0DJI9 122 aaPredicted RBP4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 NDUFB7P17568 137 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 AGAP20933 346 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 ERVK-16P61578 105 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 HSPE1P61604 102 aaKnown RBP4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 AKR1C1Q04828 323 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TFF3Q07654 80 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF616Q08AN1 781 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM267Q0VDI3 215 aaPredicted RBP4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 GUCA2BQ16661 112 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 LTC4SQ16873 150 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 HFEQ30201 348 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 KHDC3LQ587J8 217 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM41BQ5BJD5 291 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 OR2B11Q5JQS5 317 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF506Q5JVG8 444 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 UTF1Q5T230 341 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 LYG1Q8N1E2 194 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 MUC15Q8N387 334 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 OR5AN1Q8NGI8 311 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 OR4A16Q8NH70 328 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 C8orf46Q8TAG6 207 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 LINC01560Q8TB33 94 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM213BQ8TBF2 198 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 CCL17Q92583 94 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TNFRSF14Q92956 283 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM186Q96B77 213 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 PCGF1Q9BSM1 259 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM147Q9BVK8 224 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 QTRT1Q9BXR0 403 aaKnown RBP4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 UNKLQ9H9P5 680 aaKnown RBP4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 RPRMQ9NS64 109 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 FKBP11Q9NYL4 201 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 BET1LQ9NYM9 111 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF257Q9Y2Q1 563 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM96BQ9Y3D0 163 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 RFNGQ9Y644 331 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 PIEZO2Q9H5I5 2752 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 MALRD1Q5VYJ5 2156 aa4.91□□□□□ -1.62
VIPAS39-204ENST00000553576 PKDREJQ9NTG1 2253 aa4.9□□□□□ -1.62
VIPAS39-204ENST00000553576 LOC105371267A0A1B0GV96 52 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 C15orf61A6NNL5 157 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 CEBPZOSA8MTT3 80 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 J3QR06 171 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 UPK2O00526 184 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 DVL1O14640 695 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 AGPAT2O15120 278 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 PLAUP00749 431 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 IGHV2-70P01814 119 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 RBP4P02753 201 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 HSPB1P04792 205 aaKnown RBP4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 NFYBP25208 207 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 PAX6P26367 422 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TAGLN2P37802 199 aaKnown RBP4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 CCL20P78556 96 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 DLK1P80370 383 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 RUNX1Q01196 453 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM177Q53S58 311 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 PRAMEF5Q5TYX0 476 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 OR4A47Q6IF82 309 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 SLC25A24Q6NUK1 477 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 LYPD2Q6UXB3 125 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 ZNF841Q6ZN19 808 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 LILRB2Q8N423 598 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 C11orf42Q8N5U0 333 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 OR4A5Q8NH83 315 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 CLDND2Q8NHS1 167 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 OSR1Q8TAX0 266 aaPredicted RBP4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 SFT2D1Q8WV19 159 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 NEUROG1Q92886 237 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 ST6GALNAC6Q969X2 333 aa4.9□□□□□ -1.63
VIPAS39-204ENST00000553576 CLCC1Q96S66 551 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms