RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 KBTBD11O94819 623 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 ATP6V1G2O95670 118 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 RPL27AP46776 148 aaKnown RBP9.7□□□□□ -0.86
LINC00643-202ENST00000553426 RPL30P62888 115 aaKnown RBP9.7□□□□□ -0.86
LINC00643-202ENST00000553426 ZNF45Q02386 682 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 IDNKQ5T6J7 187 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 ZBTB34Q8NCN2 500 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 SECTM1Q8WVN6 248 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 SLC2A8Q9NY64 477 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 ADAM30Q9UKF2 790 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 TNCP24821 2201 aa9.7□□□□□ -0.86
LINC00643-202ENST00000553426 LOC100506127A0A0U1RQW1 187 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 HMX3A6NHT5 357 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 NPIPB5A8MRT5 1133 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 SSX5O60225 188 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
LINC00643-202ENST00000553426 IGLV2-14P01704 120 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 DEFA4P12838 97 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 FCGR2CP31995 323 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 RPL8P62917 257 aaKnown RBP9.69□□□□□ -0.86
LINC00643-202ENST00000553426 CATR1Q13166 79 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 MSMO1Q15800 293 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 ZNF773Q6PK81 442 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 SSX9Q7RTT3 188 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 LAX1Q8IWV1 398 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 OR13F1Q8NGS4 319 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 TMEM167AQ8TBQ9 72 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 SLC2A9Q9NRM0 540 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 FBXL7Q9UJT9 491 aa9.69□□□□□ -0.86
LINC00643-202ENST00000553426 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 TMEM127O75204 238 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 TPPPO94811 219 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 HIST1H1BP16401 226 aaKnown RBP9.68□□□□□ -0.86
LINC00643-202ENST00000553426 CBX5P45973 191 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 CD81P60033 236 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 HAGHQ16775 308 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 PUSL1Q8N0Z8 303 aaKnown RBP9.68□□□□□ -0.86
LINC00643-202ENST00000553426 OR4A5Q8NH83 315 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 BORCS5Q969J3 196 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 HRASLSQ9HDD0 168 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 TECRQ9NZ01 308 aaKnown RBP9.68□□□□□ -0.86
LINC00643-202ENST00000553426 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
LINC00643-202ENST00000553426 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 PPP5D1E7EU14 171 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00643-202ENST00000553426 TNFSF12O43508 249 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 PPYP01298 95 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 IL6RP08887 468 aaPredicted RBP9.67□□□□□ -0.86
LINC00643-202ENST00000553426 ZNF735P0CB33 412 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 PSMB6P28072 239 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 ARL3P36405 182 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 GUCA2BQ16661 112 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 TIMM50Q3ZCQ8 353 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 CD300EQ496F6 205 aaPredicted RBP9.67□□□□□ -0.86
LINC00643-202ENST00000553426 FAM106AQ4KMX7 169 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 HOGA1Q86XE5 327 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 CROCCP3Q8IVE0 287 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 SPAG16Q8N0X2 631 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 GVQW1Q8N7I0 195 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 OR5H6Q8NGV6 325 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 EEF1AKMT3Q96AZ1 226 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 THAP7Q9BT49 309 aaPredicted RBP9.67□□□□□ -0.86
LINC00643-202ENST00000553426 SLC5A7Q9GZV3 580 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 BET1LQ9NYM9 111 aa9.67□□□□□ -0.86
LINC00643-202ENST00000553426 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 LGALS9O00182 355 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CYB5BO43169 146 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 OR2C1O95371 312 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 HPRT1P00492 218 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CRYGCP07315 174 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CLEC2LP0C7M8 214 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 FOLR2P14207 255 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 NQO2P16083 231 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 HLA-GP17693 338 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 MECP2P51608 486 aaKnown RBP9.66□□□□□ -0.86
LINC00643-202ENST00000553426 TAS2R31P59538 309 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 FXYD4P59646 89 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 HERV-K104P61576 105 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
LINC00643-202ENST00000553426 NEDD8Q15843 81 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 ZFAND6Q6FIF0 208 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 GPHB5Q86YW7 130 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 SLC25A38Q96DW6 304 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 S100A16Q96FQ6 103 aaKnown RBP9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CXorf58Q96LI9 332 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 NEURL2Q9BR09 285 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 COMMD5Q9GZQ3 224 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 AUNIPQ9H7T9 357 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 PLEKHA3Q9HB20 300 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 IFT46Q9NQC8 304 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 THYN1Q9P016 225 aa9.66□□□□□ -0.86
LINC00643-202ENST00000553426 CEPT1Q9Y6K0 416 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms