RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 SCOCQ9UIL1 159 aa11.89□□□□□ -0.51
SHMT2-204ENST00000553324 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 GPR31O00270 319 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 RAMP3O60896 148 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 PGLYRP1O75594 196 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-204ENST00000553324 OR9G9P0C7N8 305 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 TBPP20226 339 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 INSL3P51460 131 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 OR51H1Q8NH63 302 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 GPHA2Q96T91 129 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 TINAGL1Q9GZM7 467 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-204ENST00000553324 RANGRFQ9HD47 186 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-204ENST00000553324 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-204ENST00000553324 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 CCDC59Q9P031 241 aaKnown RBP11.88□□□□□ -0.51
SHMT2-204ENST00000553324 MTFP1Q9UDX5 166 aa11.88□□□□□ -0.51
SHMT2-204ENST00000553324 FGF2P09038 288 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 F2RP25116 425 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 UCP3P55916 312 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
SHMT2-204ENST00000553324 SSBP1Q04837 148 aaKnown RBP11.87□□□□□ -0.51
SHMT2-204ENST00000553324 POU2AF1Q16633 256 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 TTC9CQ8N5M4 171 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 DYNC2LI1Q8TCX1 351 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 MRAPQ8TCY5 172 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
SHMT2-204ENST00000553324 SEC14L6B5MCN3 397 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 GABARAPH6UMI1 98 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 CTDSP2O14595 271 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 ZP3P21754 424 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 RPL27AP46776 148 aaKnown RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 ERVK-16P61578 105 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 DGCR2P98153 550 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 RNASE10Q5GAN6 216 aaKnown RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 OR4A47Q6IF82 309 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 SSX9Q7RTT3 188 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 CADM3Q8N126 398 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 ARRDC1Q8N5I2 433 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 ADAD2Q8NCV1 583 aaKnown RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
SHMT2-204ENST00000553324 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
SHMT2-204ENST00000553324 DPPA5A6NC42 116 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 FAM223BA6NKX1 122 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 OVOL1O14753 267 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 DHFRP00374 187 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 RLN1P04808 185 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 APELAP0DMC3 54 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 HLA-GP17693 338 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-204ENST00000553324 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
SHMT2-204ENST00000553324 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 ZNF429Q86V71 674 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 FAM223AQ8IWN6 122 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 TMEM229BQ8NBD8 167 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 DMBX1Q8NFW5 382 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 DIRAS2Q96HU8 199 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 MIXL1Q9H2W2 232 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 ZNF257Q9Y2Q1 563 aa11.85□□□□□ -0.51
SHMT2-204ENST00000553324 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 A0A087WW49 117 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 NPIPB5A8MRT5 1133 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 H3BMQ9 156 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 TAS2R19P59542 299 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 KRTAP10-11P60412 298 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 TATDN3Q17R31 274 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 ZNF343Q6P1L6 599 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 LAX1Q8IWV1 398 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-204ENST00000553324 ZNF486Q96H40 463 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-204ENST00000553324 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
SHMT2-204ENST00000553324 SRSF8Q9BRL6 282 aaKnown RBP11.84□□□□□ -0.51
SHMT2-204ENST00000553324 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 FXYD6Q9H0Q3 95 aa11.84□□□□□ -0.51
SHMT2-204ENST00000553324 TRBV9A0A0B4J1U6 114 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 M0QYG6 137 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 UPK2O00526 184 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 CTDSPLO15194 276 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 S1PR2O95136 353 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 CD3DP04234 171 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms