RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 SLURP1P55000 103 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 DCUN1D5Q9BTE7 237 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 EXTL2Q9UBQ6 330 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 KLK11Q9UBX7 282 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 MTFP1Q9UDX5 166 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 COL7A1Q02388 2944 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 LINC01619G3V211 115 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 HPRT1P00492 218 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 HSPB1P04792 205 aaKnown RBP14.82□□□□□ -0.04
PTCH1-227ENST00000553256 OR9G9P0C7N8 305 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 APELAP0DMC3 54 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 RAB25P57735 213 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 TAS2R31P59538 309 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 ZNF585BQ52M93 769 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 OR4A47Q6IF82 309 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 ZNF343Q6P1L6 599 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 LHFPL1Q86WI0 220 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 LAX1Q8IWV1 398 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 CADM3Q8N126 398 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 OR6F1Q8NGZ6 308 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 OR52I2Q8NH67 350 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 VSTM2AQ8TAG5 236 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 PLEKHA2Q9HB19 425 aa14.82□□□□□ -0.04
PTCH1-227ENST00000553256 CCDC59Q9P031 241 aaKnown RBP14.82□□□□□ -0.04
PTCH1-227ENST00000553256 TRAV3A0A0B4J244 114 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 CREBL2O60519 120 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-227ENST00000553256 HRASP01112 189 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 FGF2P09038 288 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 MYOD1P15172 320 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 MAS1LP35410 378 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 UCP3P55916 312 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 HERV-K104P61576 105 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 DEFA5Q01523 94 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 C9orf66Q5T8R8 295 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 RSRP1Q9BUV0 290 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 SLIRPQ9GZT3 109 aaKnown RBP14.81□□□□□ -0.04
PTCH1-227ENST00000553256 DMRT1Q9Y5R6 373 aa14.81□□□□□ -0.04
PTCH1-227ENST00000553256 FAM25AB3EWG3 89 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 FAM25CB3EWG5 89 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 FAM25GB3EWG6 89 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 SEC14L6B5MCN3 397 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 H3BMQ9 156 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 S1PR2O95136 353 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 CD74P04233 296 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 CRYGCP07315 174 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 CATR1Q13166 79 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 C19orf35Q6ZS72 473 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 OR51H1Q8NH63 302 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 OR4A5Q8NH83 315 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 SPIN2AQ99865 258 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 SPIN2BQ9BPZ2 258 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 SOSTQ9BQB4 213 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 NXF2Q9GZY0 626 aaKnown RBP14.8□□□□□ -0.04
PTCH1-227ENST00000553256 CEPT1Q9Y6K0 416 aa14.8□□□□□ -0.04
PTCH1-227ENST00000553256 HMX3A6NHT5 357 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 NPIPB5A8MRT5 1133 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 GPR31O00270 319 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 UPK2O00526 184 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 OVOL1O14753 267 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 TRBV12-3P01733 135 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 RLN1P04808 185 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 NQO2P16083 231 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 F2RP25116 425 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 CD40LGP29965 261 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 RPL8P62917 257 aaKnown RBP14.79□□□□□ -0.04
PTCH1-227ENST00000553256 SSX9Q7RTT3 188 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 HUWE1Q7Z6Z7 4374 aaKnown RBP14.79□□□□□ -0.04
PTCH1-227ENST00000553256 CD300LFQ8TDQ1 290 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 BORCS5Q969J3 196 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 ISOC1Q96CN7 298 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 USMG5Q96IX5 58 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 FANCD2OSQ96PS1 177 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 AKIP1Q9NQ31 210 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 SLC2A9Q9NRM0 540 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 COMMD9Q9P000 198 aa14.79□□□□□ -0.04
PTCH1-227ENST00000553256 A0A0G2JLM5 398 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 PRH1P02810 166 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 HLA-GP17693 338 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 RPL27AP46776 148 aaKnown RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 INSL3P51460 131 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 OR2B8PP59922 312 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 DGCR2P98153 550 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 KLF5Q13887 457 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 ACSM6Q6P461 480 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 IL34Q6ZMJ4 242 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 FCAMRQ8WWV6 532 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 DPF1Q92782 380 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 MRGPRFQ96AM1 343 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 DGCR14Q96DF8 476 aaKnown RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 RBM38Q9H0Z9 239 aaKnown RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 ZNF355PQ9NSJ1 428 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 FAM212BQ9NTI7 297 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 COA4Q9NYJ1 87 aa14.78□□□□□ -0.04
PTCH1-227ENST00000553256 LSM4Q9Y4Z0 139 aaKnown RBP14.78□□□□□ -0.04
PTCH1-227ENST00000553256 M0QYG6 137 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 CD3DP04234 171 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 AREGP15514 252 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 CTRB1P17538 263 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 CTRB2Q6GPI1 263 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms