RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TPPP2P59282 170 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 PUSL1Q8N0Z8 303 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 DMBX1Q8NFW5 382 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 TMEM167AQ8TBQ9 72 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 MYOZ3Q8TDC0 251 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 CASTOR1Q8WTX7 329 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 DGCR14Q96DF8 476 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 SPIN2AQ99865 258 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 SPIN2BQ9BPZ2 258 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 RSRP1Q9BUV0 290 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 SLA2Q9H6Q3 261 aa14.41□□□□□ -0.1
PRPF40B-216ENST00000552301 VWFP04275 2813 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 MSGN1A6NI15 193 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 DISC1C4P0D8 188 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 CCL24O00175 119 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 GSTZ1O43708 216 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 S1PR2O95136 353 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 TRGV3P03979 118 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 AKAIN1P0CW23 69 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 MAS1LP35410 378 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 RAB25P57735 213 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 DEFB136Q30KP8 78 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 OR4A47Q6IF82 309 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 ETV3LQ6ZN32 361 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 ZNF491Q8N8L2 437 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 OR5T1Q8NG75 326 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 OR4A5Q8NH83 315 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 MS4A10Q96PG2 267 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 OR5B12Q96R08 314 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 COA4Q9NYJ1 87 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 BET1LQ9NYM9 111 aa14.4□□□□□ -0.1
PRPF40B-216ENST00000552301 H3BUA1 57 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 APELAP0DMC3 54 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 RPL27AP46776 148 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 RPL8P62917 257 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 MRGPRG-AS1Q2M3A8 158 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 PYDC2Q56P42 97 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 C10orf55Q5SWW7 151 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 TBC1D26Q86UD7 250 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 LHFPL1Q86WI0 220 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 C1QL4Q86Z23 238 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 MRPL41Q8IXM3 137 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 LINC00482Q8N8I6 264 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 OR4D10Q8NGI6 311 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 RAX2Q96IS3 184 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 DUX3Q96PT4 197 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 GNB4Q9HAV0 340 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 SLC2A9Q9NRM0 540 aa14.39□□□□□ -0.11
PRPF40B-216ENST00000552301 ECI1P42126 302 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 LPAR6P43657 344 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 POU2AF1Q16633 256 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 SPANXN2Q5MJ10 180 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 TERB2Q8NHR7 220 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 ZFAND1Q8TCF1 268 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 FYTTD1Q96QD9 318 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 P2RX4Q99571 388 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 SOSTQ9BQB4 213 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 TMEM140Q9NV12 185 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 COPZ2Q9P299 210 aa14.38□□□□□ -0.11
PRPF40B-216ENST00000552301 DPPA5A6NC42 116 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 G3V4G9 280 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 OR9G9P0C7N8 305 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 RPA2P15927 270 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 HLA-GP17693 338 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 FAAP20Q6NZ36 180 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 CCDC71LQ8N9Z2 235 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 WFDC9Q8NEX5 89 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 OR4C16Q8NGL9 310 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 DPF1Q92782 380 aa14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 RCC1LQ96I51 464 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-216ENST00000552301 C13orf42A0A1B0GVH6 325 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 ANKRD20A5PA0PJZ0 165 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 DUS4LO95620 317 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 PI3P19957 117 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 PIGPP57054 158 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 RND3P61587 244 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 KIAA0141Q14154 515 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 ASPHD1Q5U4P2 390 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 SLC25A42Q86VD7 318 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 OR11H1Q8NG94 326 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 PRRT1Q99946 306 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 THAP7Q9BT49 309 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 MCRIP2Q9BUT9 160 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 GPR61Q9BZJ8 451 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 COMMD5Q9GZQ3 224 aa14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 C14orf166Q9Y224 244 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-216ENST00000552301 A0A0G2JLM5 398 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 UPK2O00526 184 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 KRASP01116 189 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 IGHV3-11P01762 117 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 SERPINE2P07093 398 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 LGALS1P09382 135 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 OR8U8P0C7N1 319 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 IGLL1P15814 213 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 FAUP35544 74 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms