RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 KIAA2026Q5HYC2 2103 aa4.39□□□□□ -1.71
LSM3P2-201ENST00000551246 DOCK9Q9BZ29 2069 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1D-13A0A0B4J2D9 117 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 C5orf63A6NC05 138 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 A6NDN8 102 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A10PA6NDY2 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A18PA6NE21 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A16PA6NEW6 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A20PA6NIJ5 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A8PA6NJQ4 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A7PA6NKC0 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 LRRC30A6NM36 301 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 CD300LBA8K4G0 201 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A22PA8MWA6 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A12PA8MX19 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A5PA8MXJ8 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 VSTM5A8MXK1 200 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A23PA8MXZ1 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1-5P01602 117 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 LIPFP07098 398 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A15PP0C7V4 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A13PP0C7W8 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A14PP0C7W9 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM90A24PP0C7X0 464 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 STAG3L2P0CL84 134 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1-13P0DP09 117 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PSG2P11465 335 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 COX5AP20674 150 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 F2RP25116 425 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 SRIP30626 198 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 METAP1P53582 386 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FBXW4P57775 412 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FXYD4P59646 89 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PLP1P60201 277 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 HERV-K104P61576 105 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC38A11Q08AI6 406 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 SMAGPQ0VAQ4 97 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ODF1Q14990 250 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 RSPO1Q2MKA7 263 aaPredicted RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 RPEL1Q2QD12 228 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM162BQ5T6X4 162 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PRAMEF5Q5TYX0 476 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 GDF5OSQ5U4N7 250 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 LINC01545Q5VT33 79 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PRAMEF6Q5VXH4 476 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 WDR74Q6RFH5 385 aaPredicted RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF818PQ6ZRF7 136 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 Q6ZS92 163 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FA2HQ7L5A8 372 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM25Q86YD3 366 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 OR8I2Q8N0Y5 310 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ATOH7Q8N100 152 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 GCSAMQ8N6F7 178 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF645Q8N7E2 425 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF418Q8TF45 676 aaPredicted RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 CACNG8Q8WXS5 425 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 H1FXQ92522 213 aaKnown RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM70Q9BUB7 260 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 OR2D2Q9H210 308 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 FNDC4Q9H6D8 234 aaPredicted RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC25A22Q9H936 323 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 CENPMQ9NSP4 180 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 THYN1Q9P016 225 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PRO0461Q9UI25 63 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 ERG28Q9UKR5 140 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 TSSC4Q9Y5U2 329 aaPredicted RBP4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 HEBP2Q9Y5Z4 205 aa4.38□□□□□ -1.71
LSM3P2-201ENST00000551246 A0A087X0K7 114 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 TMED7-TICAM2A0A0A6YYA0 188 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1-6A0A0C4DH72 117 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1-12A0A0C4DH73 117 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 A0A0G2JLM5 398 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 A0A1B0GXF2 115 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 IZUMO1RA6ND01 250 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 OR4C46A6NHA9 309 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF716A6NP11 495 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 C11orf98E9PRG8 122 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC17A3O00476 420 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 ISLRO14498 428 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 PDCD6O75340 191 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 DHRS3O75911 302 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 UTS2O95399 124 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV1D-12P01611 117 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 OR5AL1P0C617 328 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 HLA-DOBP13765 273 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 EGR1P18146 543 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 GATA3P23771 443 aa4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 DAP3P51398 398 aaKnown RBP4.37□□□□□ -1.71
LSM3P2-201ENST00000551246 ARF3P61204 181 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms