RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 NFYAP23511 347 aaPredicted RBP17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 OR2B11Q5JQS5 317 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 C10orf55Q5SWW7 151 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 HACD4Q5VWC8 232 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 ZNF57Q68EA5 555 aaPredicted RBP17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 OR4A47Q6IF82 309 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 CNIH2Q6PI25 160 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 TCTEX1D2Q8WW35 142 aa17.4■□□□□ 0.38
SMARCD1-209ENST00000550477 IGKV1D-8A0A087WSZ0 117 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 ZNF320A2RRD8 509 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 DEFA4P12838 97 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 CBLN1P23435 193 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 TMEM167AQ8TBQ9 72 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 NDUFB11Q9NX14 153 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 SPATA2Q9UM82 520 aa17.39■□□□□ 0.37
SMARCD1-209ENST00000550477 HLA-AP01891 365 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 GNG2P59768 71 aa17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 CLEC19AQ6UXS0 136 aa17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 VKORC1L1Q8N0U8 176 aa17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 OR52B4Q8NGK2 314 aa17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 WDR89Q96FK6 387 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-209ENST00000550477 ZNF66Q6ZN08 573 aa17.37■□□□□ 0.37
SMARCD1-209ENST00000550477 MFSD4AQ8N468 514 aa17.37■□□□□ 0.37
SMARCD1-209ENST00000550477 CXorf58Q96LI9 332 aa17.37■□□□□ 0.37
SMARCD1-209ENST00000550477 TRBV7-1A0A0A6YYK4 115 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 TEX22C9J3V5 150 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 CRYGCP07315 174 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 ZNF735P0CB33 412 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 PSMB6P28072 239 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 HSPA13P48723 471 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 RPL30P62888 115 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 RPL8P62917 257 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 C22orf42Q6IC83 251 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 PUSL1Q8N0Z8 303 aaKnown RBP17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 OR4A5Q8NH83 315 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 THYN1Q9P016 225 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 ELF5Q9UKW6 265 aaPredicted RBP17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 CSMD3Q7Z407 3707 aa17.36■□□□□ 0.37
SMARCD1-209ENST00000550477 NOTOA8MTQ0 251 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 NDUFB8O95169 186 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 IGHV3-23P01764 117 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 IL6RP08887 468 aaPredicted RBP17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 RBPMS2Q6ZRY4 209 aaKnown RBP17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 MARC2Q969Z3 335 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 WFDC10AQ9H1F0 79 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 ANXA10Q9UJ72 324 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 DMRT1Q9Y5R6 373 aa17.35■□□□□ 0.37
SMARCD1-209ENST00000550477 LOC102724200A0A096LPH7 203 aaPredicted RBP17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 CYB5BO43169 146 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 ARPC4P59998 168 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 UXS1Q8NBZ7 420 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 NRG4Q8WWG1 115 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 GGTLC1Q9BX51 225 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 TAS2R8Q9NYW2 309 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 LYSTQ99698 3801 aa17.34■□□□□ 0.37
SMARCD1-209ENST00000550477 STARD9Q9P2P6 4700 aa17.33■□□□□ 0.37
SMARCD1-209ENST00000550477 TRAV25A0A0B4J276 109 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 IGKV1D-13A0A0B4J2D9 117 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 IGLV2-14P01704 120 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 IGKV1-13P0DP09 117 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 CTRB1P17538 263 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 CTRB2Q6GPI1 263 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 SSX9Q7RTT3 188 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 TPRA1Q86W33 373 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 TMEM61Q8N0U2 210 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 ZBTB34Q8NCN2 500 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 NUDCD2Q8WVJ2 157 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 CNBD2Q96M20 576 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 FANCD2OSQ96PS1 177 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 HRASLSQ9HDD0 168 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 DNAH1Q9P2D7 4330 aa17.33■□□□□ 0.36
SMARCD1-209ENST00000550477 TMEM235A6NFC5 223 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 A8MWP6 167 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 CLEC3BP05452 202 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 AREGP15514 252 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 HLA-GP17693 338 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 SLC38A6Q8IZM9 456 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 CCDC140Q96MF4 163 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 BET1LQ9NYM9 111 aa17.32■□□□□ 0.36
SMARCD1-209ENST00000550477 ANKRD65E5RJM6 399 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 MRPS14O60783 128 aaKnown RBP17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 CATR1Q13166 79 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 MSMO1Q15800 293 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 CACNG8Q8WXS5 425 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 MRPL27Q9P0M9 148 aaKnown RBP17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 UFC1Q9Y3C8 167 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 S4R3C0 116 aa17.31■□□□□ 0.36
SMARCD1-209ENST00000550477 TMEM213A2RRL7 107 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 E7EUB6 86 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 SCAF4O95104 1147 aaKnown RBP17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 MYOD1P15172 320 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 EDN2P20800 178 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 FGF9P31371 208 aaPredicted RBP17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 KLK9Q2XQG4 91 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 OR1L6Q8NGR2 347 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 SECTM1Q8WVN6 248 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 COMMD5Q9GZQ3 224 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 MLXQ9UH92 298 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 DAPK2Q9UIK4 370 aa17.3■□□□□ 0.36
SMARCD1-209ENST00000550477 KLK9Q9UKQ9 250 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms