RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CD36P16671 472 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 DTYMKP23919 212 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 CRHBPP24387 322 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 TALDO1P37837 337 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 CD81P60033 236 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ZNF45Q02386 682 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ATP5G2Q06055 141 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ARFRP1Q13795 201 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 SSX1Q16384 188 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 SLC25A42Q86VD7 318 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 MMD2Q8IY49 270 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 TTC9CQ8N5M4 171 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ZNF645Q8N7E2 425 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 VSTM2AQ8TAG5 236 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 MAFIPQ8WZ33 124 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 NEURL2Q9BR09 285 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 CCDC90BQ9GZT6 254 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 HIPK2Q9H2X6 1198 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ZNF430Q9H8G1 570 aaPredicted RBP5.76□□□□□ -1.49
NEK3-201ENST00000550331 PLEKHA3Q9HB20 300 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ZC4H2Q9NQZ6 224 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 MRPS7Q9Y2R9 242 aaKnown RBP5.76□□□□□ -1.49
NEK3-201ENST00000550331 CEPT1Q9Y6K0 416 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 TNCP24821 2201 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 A0A075B6Q4 140 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 IGKV1D-8A0A087WSZ0 117 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 LGALS9O00182 355 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 FCGR3BO75015 233 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 GGCTO75223 188 aaKnown RBP5.75□□□□□ -1.49
NEK3-201ENST00000550331 SLC22A5O76082 557 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 CTXN2P0C2S0 81 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 GALP22466 123 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 MYL9P24844 172 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 KIR2DS2P43631 304 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 AQP4P55087 323 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 OR10A3P58181 314 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 TBCEQ15813 527 aaPredicted RBP5.75□□□□□ -1.49
NEK3-201ENST00000550331 DEFB114Q30KQ6 69 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 C15orf32Q32M92 178 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 CD300EQ496F6 205 aaPredicted RBP5.75□□□□□ -1.49
NEK3-201ENST00000550331 KCTD9Q7L273 389 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 ZNF367Q7RTV3 350 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 DYNLRB2Q8TF09 96 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 DCUN1D5Q9BTE7 237 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 NDUFB11Q9NX14 153 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 TECRQ9NZ01 308 aaKnown RBP5.75□□□□□ -1.49
NEK3-201ENST00000550331 ZNF257Q9Y2Q1 563 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 RBMX2Q9Y388 322 aaKnown RBP5.75□□□□□ -1.49
NEK3-201ENST00000550331 PRELID3BQ9Y3B1 194 aa5.75□□□□□ -1.49
NEK3-201ENST00000550331 TRDV1A0A1B0GX56 115 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 C2orf70A6NJV1 201 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 ZNF785A8K8V0 405 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 NPIPB5A8MRT5 1133 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 OR11H12B2RN74 326 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 SCGNO76038 276 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 KBTBD11O94819 623 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 IGLV2-14P01704 120 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 HLA-DQB1P01920 261 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 PRH1P02810 166 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 CD7P09564 240 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 FOLR2P14207 255 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 RAB3BP20337 219 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 MAP2K4P45985 399 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 C10orf55Q5SWW7 151 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 SLC16A13Q7RTY0 426 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 GPHB5Q86YW7 130 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 OR4S2Q8NH73 311 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 TMEM167AQ8TBQ9 72 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 OR51E2Q9H255 320 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 DCSTAMPQ9H295 470 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 RETNQ9HD89 108 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 BLOC1S6Q9UL45 172 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 OR2W1Q9Y3N9 320 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
NEK3-201ENST00000550331 DPPA5A6NC42 116 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 A8MWP6 167 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 TEX22C9J3V5 150 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 PPP5D1E7EU14 171 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 OR2J3O76001 311 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 DHFRP00374 187 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 CRYGCP07315 174 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 ZNF735P0CB33 412 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 CBLN1P23435 193 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 NFYAP23511 347 aaPredicted RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 MAS1LP35410 378 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 RPL27AP46776 148 aaKnown RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 RPL30P62888 115 aaKnown RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 EIF4EBP1Q13541 118 aaPredicted RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 KLK9Q2XQG4 91 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 OR2B11Q5JQS5 317 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 HACD4Q5VWC8 232 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 CNIH2Q6PI25 160 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 NR2C2APQ86WQ0 139 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 DEFB125Q8N687 156 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 NRG4Q8WWG1 115 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 WDR89Q96FK6 387 aaPredicted RBP5.73□□□□□ -1.49
NEK3-201ENST00000550331 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
NEK3-201ENST00000550331 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms