RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 GLT8D1Q68CQ7 371 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 SLC25A42Q86VD7 318 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 C11orf45Q8TAV5 145 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 C2CD4CQ8TF44 421 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 LPAR5Q9H1C0 372 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 C12orf4Q9NQ89 552 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 ZNF257Q9Y2Q1 563 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 IRGMA1A4Y4 181 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 CELP19835 753 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 TMEM50BP56557 158 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 CDK10Q15131 360 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 IGSF11Q5DX21 431 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 LRRTM1Q86UE6 522 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 MMD2Q8IY49 270 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 OR4A4PQ8NGN8 299 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 MARC2Q969Z3 335 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 TMEM80Q96HE8 168 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 ARHGAP5-AS1Q96IT6 56 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
VPS29-208ENST00000550267 CMSS1Q9BQ75 279 aaKnown RBP7.71□□□□□ -1.18
VPS29-208ENST00000550267 MFFQ9GZY8 342 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 MAP6D1Q9H9H5 199 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
VPS29-208ENST00000550267 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
VPS29-208ENST00000550267 IGHV3-35A0A0C4DH35 117 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 DPPA5A6NC42 116 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 LINC00473A8K010 186 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 NPIPB5A8MRT5 1133 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 FOXI3A8MTJ6 420 aaPredicted RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 E7EUB6 86 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 FABP7O15540 132 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 CREBL2O60519 120 aaPredicted RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 MAPK3P27361 379 aaPredicted RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 DUTP33316 252 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 SERPINB10P48595 397 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 TCTAP57738 103 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 TAS2R43P59537 309 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 MED21Q13503 144 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 TPBGQ13641 420 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 RBM48Q5RL73 367 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 GVQW1Q8N7I0 195 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 OSR1Q8TAX0 266 aaPredicted RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 EEF1AKMT3Q96AZ1 226 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 FYTTD1Q96QD9 318 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 URM1Q9BTM9 101 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 PECRQ9BY49 303 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 HSF4Q9ULV5 492 aa7.7□□□□□ -1.18
VPS29-208ENST00000550267 RBM7Q9Y580 266 aaKnown RBP7.7□□□□□ -1.18
VPS29-208ENST00000550267 PKHD1P08F94 4074 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 MFSD2BA6NFX1 497 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 IGLL5B9A064 214 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 TSPAN4O14817 238 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 CIB2O75838 187 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
VPS29-208ENST00000550267 GSTT2P0CG29 244 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 GSTT2BP0CG30 244 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 AREGP15514 252 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 RPL27AP46776 148 aaKnown RBP7.69□□□□□ -1.18
VPS29-208ENST00000550267 P2RY14Q15391 338 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 MED22Q15528 200 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 ACSM3Q53FZ2 586 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 TTC23Q5W5X9 447 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 VKORC1L1Q8N0U8 176 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 FAM89BQ8N5H3 189 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 OR6M1Q8NGM8 313 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 OR10J5Q8NHC4 309 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 ADTRPQ96IZ2 230 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 RARRES2Q99969 163 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 DCUN1D5Q9BTE7 237 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 C5orf66Q9H5L9 145 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 UFC1Q9Y3C8 167 aa7.69□□□□□ -1.18
VPS29-208ENST00000550267 TRBV6-7A0A0A0MS04 114 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 A0A1B0GW64 132 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 PRSS29PA6NIE9 313 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 DEFB4AO15263 64 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 FCGR3BO75015 233 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 REG1AP05451 166 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 CLEC3BP05452 202 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 CD1AP06126 327 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 CRYGCP07315 174 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 GALP22466 123 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 GPR183P32249 361 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 ELLP55199 621 aaPredicted RBP7.68□□□□□ -1.18
VPS29-208ENST00000550267 OR2B11Q5JQS5 317 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 PLAC9Q5JTB6 97 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 SETD9Q8NE22 299 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 OR11H2Q8NH07 326 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 CD300LFQ8TDQ1 290 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 MAFIPQ8WZ33 124 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 C9orf16Q9BUW7 83 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms