RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 OR2S2Q9NQN1 319 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 COA4Q9NYJ1 87 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 TECRQ9NZ01 308 aaKnown RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 MLXQ9UH92 298 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ING4Q9UNL4 249 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ST3GAL6Q9Y274 331 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 IGLV2-18A0A075B6J9 118 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 IGHV4-4A0A075B6R2 117 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 H0YJW9 148 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 H7C2Y5 167 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 GEMIN2O14893 280 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 S1PR2O95136 353 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 CDRT1O95170 752 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 FADS2O95864 444 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 PRH1P02810 166 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 CT45A6P0DMU7 189 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 CT45A5P0DMU8 189 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 CT45A7P0DMV0 189 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RCC1P18754 421 aaPredicted RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 CBLN1P23435 193 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RBM11P57052 281 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 PJVKQ0ZLH3 352 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RIPK1Q13546 671 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 EXOSC2Q13868 293 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RSU1Q15404 277 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RPL39P5Q59GN2 51 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 TMEM244Q5VVB8 128 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 STHQ8IWL8 128 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 POM121L12Q8N7R1 296 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 PXT1Q8NFP0 134 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 OR2G2Q8NGZ5 317 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 TSEN15Q8WW01 171 aaKnown RBP4.72□□□□□ -1.65
LIMA1-204ENST00000549064 LGALS12Q96DT0 336 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 RARRES2Q99969 163 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 FAM192AQ9GZU8 254 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 IFI27L2Q9H2X8 130 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 C5orf66Q9H5L9 145 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 PSORS1C1Q9UIG5 152 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 GNG8Q9UK08 70 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 TRAPPC2LQ9UL33 140 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 AGRNO00468 2067 aa4.72□□□□□ -1.65
LIMA1-204ENST00000549064 KIR2DL5BA0A0G2JN68 375 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 KIR2DL5BA0A0G2JPC4 375 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 TMEM213A2RRL7 107 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 SLC22A1O15245 554 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 NOL3O60936 208 aaKnown RBP4.71□□□□□ -1.66
LIMA1-204ENST00000549064 DIRAS3O95661 229 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 APOHP02749 345 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-204ENST00000549064 FCGR1AP12314 374 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 PRKACGP22612 351 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 LINC00205P59089 165 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 RHOGP84095 191 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 LGALS9BQ3B8N2 356 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 C6orf183Q5T699 404 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 AADACL4Q5VUY2 407 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 KIR2DL5AQ8N109 375 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 DRAXINQ8NBI3 349 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-204ENST00000549064 OR10H4Q8NGA5 316 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 OR51A2Q8NGJ7 313 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 OR1L6Q8NGR2 347 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 OR11H2Q8NH07 326 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 KIR2DL5BQ8NHK3 375 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 GHSRQ92847 366 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 USMG5Q96IX5 58 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 GPER1Q99527 375 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
LIMA1-204ENST00000549064 TAF9BQ9HBM6 251 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 ZNF230Q9UIE0 474 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-204ENST00000549064 WASHC3Q9Y3C0 194 aa4.71□□□□□ -1.66
LIMA1-204ENST00000549064 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.7□□□□□ -1.66
LIMA1-204ENST00000549064 OR5H14A6NHG9 310 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 SULT1B1O43704 296 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 SULT1C4O75897 302 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 MAS1P04201 325 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 IGKV1-16P04430 117 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ISG15P05161 165 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 RBMY1A1P0DJD3 496 aaKnown RBP4.7□□□□□ -1.66
LIMA1-204ENST00000549064 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 SERPINA2P20848 420 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 LGALS7P47929 136 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 CRISP1P54107 249 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ZNF85Q03923 595 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 OPCMLQ14982 345 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ANKRD55Q3KP44 614 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 TMEM30BQ3MIR4 351 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 NXNL2Q5VZ03 156 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 PVRIGQ6DKI7 326 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ASCL4Q6XD76 172 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 Q6ZR54 194 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 FAM220AQ7Z4H9 259 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 STX19Q8N4C7 294 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ADAD2Q8NCV1 583 aaKnown RBP4.7□□□□□ -1.66
LIMA1-204ENST00000549064 OR5B3Q8NH48 314 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 OR52N1Q8NH53 320 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 THRSPQ92748 146 aa4.7□□□□□ -1.66
LIMA1-204ENST00000549064 ABHD14BQ96IU4 210 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms