RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 CLVS1Q8IUQ0 354 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-217ENST00000548420 LFNGQ8NES3 379 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 SECTM1Q8WVN6 248 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 ARPC1AQ92747 370 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 FAM103A1Q9BTL3 118 aaKnown RBP10.7□□□□□ -0.7
PTCH1-217ENST00000548420 MRPS7Q9Y2R9 242 aaKnown RBP10.7□□□□□ -0.7
PTCH1-217ENST00000548420 FCGR3BO75015 233 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 BRI3O95415 125 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 GNRHRP30968 328 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 INSL3P51460 131 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 TAS2R46P59540 309 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 FHL3Q13643 280 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 PRSS8Q16651 343 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 VMA21Q3ZAQ7 101 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 ACTBL2Q562R1 376 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 PYHIN1Q6K0P9 492 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 TMEM65Q6PI78 240 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 MOB3AQ96BX8 217 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 TMEM68Q96MH6 324 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 SLC5A7Q9GZV3 580 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 MIXL1Q9H2W2 232 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 EHFQ9NZC4 300 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
PTCH1-217ENST00000548420 A0A1W2PN81 502 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 PMP2P02689 132 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 CHRNA7P36544 502 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 ASPHD1Q5U4P2 390 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 UNQ5815/PRO19632Q6UWF5 114 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 ZNF818PQ6ZRF7 136 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 SNX29P2Q8IUI4 249 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 OR5H2Q8NGV7 314 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 OR4S2Q8NH73 311 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 TCTEX1D2Q8WW35 142 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 ABHD1Q96SE0 405 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 GPHA2Q96T91 129 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 GNB4Q9HAV0 340 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 TAS2R8Q9NYW2 309 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 A3GALT2U3KPV4 340 aa10.68□□□□□ -0.7
PTCH1-217ENST00000548420 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 CTDSP2O14595 271 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 RBFOX2O43251 390 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 CNIH1O95406 144 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 SAA1P0DJI8 122 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 HLA-DMAP28067 261 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 RCVRNP35243 200 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 HRH1P35367 487 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 KIR2DS2P43631 304 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 FXYD4P59646 89 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 IDO2Q6ZQW0 420 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 GRPEL2Q8TAA5 225 aa10.67□□□□□ -0.7
PTCH1-217ENST00000548420 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 CCDC59Q9P031 241 aaKnown RBP10.67□□□□□ -0.7
PTCH1-217ENST00000548420 H3BUA1 57 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 TNFSF12O43508 249 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-217ENST00000548420 HERV-K104P61576 105 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 POU2AF1Q16633 256 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 OR2B11Q5JQS5 317 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 MMD2Q8IY49 270 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 TMEM167AQ8TBQ9 72 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 ABHD5Q8WTS1 349 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 C15orf40Q8WUR7 153 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 BORCS5Q969J3 196 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 RHOVQ96L33 236 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 DCUN1D5Q9BTE7 237 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 SLA2Q9H6Q3 261 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 KLK11Q9UBX7 282 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 MTFP1Q9UDX5 166 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 CEPT1Q9Y6K0 416 aa10.66□□□□□ -0.7
PTCH1-217ENST00000548420 MSGN1A6NI15 193 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 H3BMQ9 156 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 PGLYRP1O75594 196 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-217ENST00000548420 OR2A4O95047 310 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 GNB1P62873 340 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 VKORC1L1Q8N0U8 176 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 SPAG16Q8N0X2 631 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 POC5Q8NA72 575 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 OR11H1Q8NG94 326 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 OR52I2Q8NH67 350 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 VSTM2AQ8TAG5 236 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
PTCH1-217ENST00000548420 OR2A7Q96R45 310 aa10.65□□□□□ -0.7
PTCH1-217ENST00000548420 SLIRPQ9GZT3 109 aaKnown RBP10.65□□□□□ -0.7
PTCH1-217ENST00000548420 CREBL2O60519 120 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-217ENST00000548420 KBTBD11O94819 623 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 HPRT1P00492 218 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 HRASP01112 189 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 CD40LGP29965 261 aa10.64□□□□□ -0.71
PTCH1-217ENST00000548420 MAS1LP35410 378 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms