RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 MS4A5Q9H3V2 200 aa13.28□□□□□ -0.28
CNOT2-209ENST00000548159 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
CNOT2-209ENST00000548159 SPCS3P61009 180 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 GNB1P62873 340 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 AARDQ4LEZ3 155 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 CST9LP1Q5W188 147 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 MIC13Q5XKP0 118 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 TRAT1Q6PIZ9 186 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 TMEM140Q9NV12 185 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 CALYQ9NYX4 217 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.29
CNOT2-209ENST00000548159 MYOD1P15172 320 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 CHRNA7P36544 502 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 C1orf159Q96HA4 380 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 S1PR3Q99500 378 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 MGST2Q99735 147 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.29
CNOT2-209ENST00000548159 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 F2RL2O00254 374 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 SOX15O60248 233 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 C17orf58Q2M2W7 97 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 CR1LQ2VPA4 569 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 CT45A1Q5HYN5 189 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 TGIF2LYQ8IUE0 185 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 DEFB108BQ8NET1 73 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 CT45A3Q8NHU0 189 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 PRDM13Q9H4Q3 707 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 YLPM1P49750 1951 aaKnown RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 BSNQ9UPA5 3926 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 MBD3L4A6NDZ8 208 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 MBD3L3A6NE82 208 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 MBD3L5A6NJ08 208 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 NDUFB4O95168 129 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 LHBP01229 141 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 ZNF114Q8NC26 417 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 MBD3L2Q8NHZ7 208 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-209ENST00000548159 SSMEM1Q8WWF3 244 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
CNOT2-209ENST00000548159 DSCAML1Q8TD84 2053 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 A0A1W2PPV4 95 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 CGB3P0DN86 165 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 CGB7P0DN87 165 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 CFHR2P36980 270 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 DDB2Q92466 427 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 PACRGQ96M98 296 aaPredicted RBP13.25□□□□□ -0.29
CNOT2-209ENST00000548159 OR5B12Q96R08 314 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 PIEZO2Q9H5I5 2752 aa13.25□□□□□ -0.29
CNOT2-209ENST00000548159 PPP5D1E7EU14 171 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 ARL14EPLP0DKL9 152 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 KLF3P57682 345 aaPredicted RBP13.24□□□□□ -0.29
CNOT2-209ENST00000548159 ERVK-16P61578 105 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 ANKRD11Q6UB99 2663 aaPredicted RBP13.24□□□□□ -0.29
CNOT2-209ENST00000548159 SAA2-SAA4A0A096LPE2 208 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 TGOLN2O43493 480 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 HRASP01112 189 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 SAA2P0DJI9 122 aaPredicted RBP13.24□□□□□ -0.29
CNOT2-209ENST00000548159 GAMTQ14353 236 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 LINC01551Q86U37 167 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 PPP1R35Q8TAP8 253 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
CNOT2-209ENST00000548159 RHOVQ96L33 236 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 ZNRD1Q9P1U0 126 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 PITPNC1Q9UKF7 332 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
CNOT2-209ENST00000548159 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 DCAF16Q9NXF7 216 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 ZFHX2Q9C0A1 2572 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-209ENST00000548159 ARFGEF3Q5TH69 2177 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 PCNX1Q96RV3 2341 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 TRBV20OR9-2A0A075B6H5 130 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 C1QTNF9P0C862 333 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 HIST1H1BP16401 226 aaKnown RBP13.23□□□□□ -0.29
CNOT2-209ENST00000548159 GLRXP35754 106 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 PDLIM3Q53GG5 364 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-209ENST00000548159 ARSJQ5FYB0 599 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-209ENST00000548159 FAM169BQ8N8A8 192 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 PFDN5Q99471 154 aa13.23□□□□□ -0.29
CNOT2-209ENST00000548159 K7EM74 188 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 RBFOX2O43251 390 aaKnown RBP eCLIP13.22□□□□□ -0.295e-9■■■■■ 35.5
CNOT2-209ENST00000548159 MMP23AO75900 390 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 TIMM23BQ5SRD1 257 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 SPATA31B1PQ5VZV4 182 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 TCF23Q7RTU1 214 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 OR52E5Q8NH55 327 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 FAM90A9PA6NNJ1 464 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 LY86O95711 162 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 OPRK1P41145 380 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 GNG10P50151 68 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 OR4A47Q6IF82 309 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 TMEM183AQ8IXX5 376 aa13.22□□□□□ -0.29
CNOT2-209ENST00000548159 C1orf174Q8IYL3 243 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms