RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SOX21Q9Y651 276 aaPredicted RBP0.72□□□□□ -2.29
CCDC38-204ENST00000546816 PIK3R4Q99570 1358 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 C1orf232A0A0U1RR37 186 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 H7C2G1 150 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 TYMSP04818 313 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 REG1AP05451 166 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 COX5BP10606 129 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 GPX2P18283 190 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 CCL1P22362 96 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 RPL28P46779 137 aaKnown RBP0.71□□□□□ -2.3
CCDC38-204ENST00000546816 AP1S1P61966 158 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 AKR1C1Q04828 323 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 MLLT11Q13015 90 aaPredicted RBP0.71□□□□□ -2.3
CCDC38-204ENST00000546816 SLC36A2Q495M3 483 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 TNFAIP8L3Q5GJ75 292 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 ZNF705AQ6ZN79 300 aaPredicted RBP0.71□□□□□ -2.3
CCDC38-204ENST00000546816 FAM9CQ8IZT9 166 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 Q96M85 177 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 MAP1LC3AQ9H492 121 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 PRELID1Q9Y255 219 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 TIMM9Q9Y5J7 89 aa0.71□□□□□ -2.3
CCDC38-204ENST00000546816 ABCC11Q96J66 1382 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 SCAF11Q99590 1463 aaKnown RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 IGKV2-40A0A087WW87 121 aaPredicted RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 MEIKINA0A087WXM9 373 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 A0A0A6YYH2 397 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 A0A0D9SEW6 157 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 A6NJ64 397 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 HMSDA8MTL9 139 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 DISC1C4P0D8 188 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 H3BT86 120 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 LST1O00453 97 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 PLA2G10O15496 165 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 SSNA1O43805 119 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 CREBL2O60519 120 aaPredicted RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 NSA2O95478 260 aaKnown RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 YEATS4O95619 227 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 IGKV2D-40P01614 121 aaPredicted RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 TFPTP0C1Z6 253 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 DEFA4P12838 97 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 IL9P15248 144 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 AKR1C3P42330 323 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 AQP4P55087 323 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 RAB14P61106 215 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 NNATQ16517 81 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 C5orf46Q6UWT4 87 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 UNQ6190/PRO20217Q6UXQ8 127 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 SLC22A24Q8N4F4 322 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 RPP25LQ8N5L8 163 aaKnown RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 C9orf163Q8N9P6 203 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 TMA16Q96EY4 203 aaKnown RBP0.7□□□□□ -2.3
CCDC38-204ENST00000546816 CHST6Q9GZX3 395 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 HDHD2Q9H0R4 259 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 GPR84Q9NQS5 396 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 AK3Q9UIJ7 227 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 C15orf41Q9Y2V0 281 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 SIPA1L1O43166 1804 aa0.7□□□□□ -2.3
CCDC38-204ENST00000546816 TRAV38-1A0A0B4J264 116 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 IGHV1-69-2A0A0G2JMI3 117 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 TRBV6-5A0A0K0K1A5 114 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 TMEM269A0A1B0GVZ9 245 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 OR51F1A6NGY5 319 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 OR4C45A6NMZ5 311 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 CXCR6O00574 342 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 PFDN6O15212 129 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 RPL12P30050 165 aaKnown RBP0.69□□□□□ -2.3
CCDC38-204ENST00000546816 HIST1H4AP62805 103 aaKnown RBP0.69□□□□□ -2.3
CCDC38-204ENST00000546816 RPL30P62888 115 aaKnown RBP0.69□□□□□ -2.3
CCDC38-204ENST00000546816 MOGQ16653 247 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 Q1T7F1 81 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 FAM151BQ6UXP7 276 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 FP248Q71RG6 208 aaPredicted RBP0.69□□□□□ -2.3
CCDC38-204ENST00000546816 SSX8Q7RTT4 187 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 SLC36A1Q7Z2H8 476 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 LLPHQ9BRT6 129 aaKnown RBP0.69□□□□□ -2.3
CCDC38-204ENST00000546816 OR51I2Q9H344 312 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 CXorf21Q9HAI6 301 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 NAV1Q8NEY1 1877 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 FLT4P35916 1363 aa0.69□□□□□ -2.3
CCDC38-204ENST00000546816 KIAA2026Q5HYC2 2103 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 SMARCA4P51532 1647 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 CUL9Q8IWT3 2517 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 TRAPPC2LH3BP13 241 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 MRPS14O60783 128 aaKnown RBP0.68□□□□□ -2.3
CCDC38-204ENST00000546816 MSMBP08118 114 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 BLVRAP53004 296 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 MAP3K7CLP57077 242 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 POLR2GP62487 172 aaKnown RBP eCLIP0.68□□□□□ -2.3
CCDC38-204ENST00000546816 DMTNQ08495 405 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 ARHGAP11BQ3KRB8 267 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 LRRN1Q6UXK5 716 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 C7orf65Q6ZTY9 151 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 HIST2H3AQ71DI3 136 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 ZNF550Q7Z398 422 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 SLC51BQ86UW2 128 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 COMMD7Q86VX2 200 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 PIGXQ8TBF5 258 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 OR8D2Q9GZM6 311 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms