RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 ZNF833PQ6ZTB9 187 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 GAPTQ8N292 157 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 SAMD12Q8N8I0 201 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 MLXQ9UH92 298 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 UBQLN2Q9UHD9 624 aa11.31□□□□□ -0.6
CLSTN3-216ENST00000545663 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 SOCS1O15524 211 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 SPINT2O43291 252 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 CD3GP09693 182 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 HIST1H1DP16402 221 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 NICN1Q9BSH3 213 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 ABHD14AQ9BUJ0 271 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 C12orf4Q9NQ89 552 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 COMMD3Q9UBI1 195 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
CLSTN3-216ENST00000545663 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 APELAP0DMC3 54 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 CBLN1P23435 193 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 ZNF57Q68EA5 555 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 C6orf201Q7Z4U5 140 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 OR4K15Q8NH41 348 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 CYYR1Q96J86 154 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 PECRQ9BY49 303 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 KCNK15Q9H427 330 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
CLSTN3-216ENST00000545663 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 PPP5D1E7EU14 171 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 RGS5O15539 181 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 CT45A6P0DMU7 189 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 CT45A5P0DMU8 189 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 CT45A7P0DMV0 189 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 TMEM50BP56557 158 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 TMEM69Q5SWH9 247 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 MCFD2Q8NI22 146 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 USMG5Q96IX5 58 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 RARRES2Q99969 163 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 FAAP24Q9BTP7 215 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
CLSTN3-216ENST00000545663 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 MFNGO00587 321 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 NAPSAO96009 420 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 DTYMKP23919 212 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 S100A5P33763 92 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 CBX5P45973 191 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 GNG2P59768 71 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 CDNFQ49AH0 187 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 HACD4Q5VWC8 232 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
CLSTN3-216ENST00000545663 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 A6NHS1 94 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 FAM25AB3EWG3 89 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 FAM25CB3EWG5 89 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 FAM25GB3EWG6 89 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 H7C2Y5 167 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 S1PR2O95136 353 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 OR2C1O95371 312 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 DIRAS3O95661 229 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 PRH1P02810 166 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 C6orf62Q9GZU0 229 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 AK3Q9UIJ7 227 aa11.26□□□□□ -0.61
CLSTN3-216ENST00000545663 H0YJW9 148 aa11.25□□□□□ -0.61
CLSTN3-216ENST00000545663 HPGDSO60760 199 aa11.25□□□□□ -0.61
CLSTN3-216ENST00000545663 GNB3P16520 340 aa11.25□□□□□ -0.61
CLSTN3-216ENST00000545663 LGALS7P47929 136 aa11.25□□□□□ -0.61
CLSTN3-216ENST00000545663 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-216ENST00000545663 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms