RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	EHF	Q9NZC4	300 aa		10.29	□□□□□ -0.76
POLE-222	ENST00000545015	COMMD3	Q9UBI1	195 aa		10.29	□□□□□ -0.76
POLE-222	ENST00000545015	MEIS3P1	A6NDR6	274 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	NPIPB5	A8MRT5	1133 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	SULT1C2	O00338	296 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	SAP30	O75446	220 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	RBMXL2	O75526	392 aa	Known RBP	10.28	□□□□□ -0.76
POLE-222	ENST00000545015	HPRT1	P00492	218 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	ZNF735	P0CB33	412 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	RFX2	P48378	723 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	TAS2R31	P59538	309 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	FAM209B	Q5JX69	171 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	C10orf55	Q5SWW7	151 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	LYSMD2	Q8IV50	215 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	VKORC1L1	Q8N0U8	176 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	SPAG16	Q8N0X2	631 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	PLEKHA2	Q9HB19	425 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	PEF1	Q9UBV8	284 aa	Known RBP	10.28	□□□□□ -0.76
POLE-222	ENST00000545015	ZNF257	Q9Y2Q1	563 aa		10.28	□□□□□ -0.76
POLE-222	ENST00000545015	SMIM31	A0A1B0GVY4	71 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015		A0A1B0GW64	132 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	TNFSF12	O43508	249 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	FCER2	P06734	321 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	CRYGC	P07315	174 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	NQO2	P16083	231 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	ELK1	P19419	428 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	RPL27A	P46776	148 aa	Known RBP	10.27	□□□□□ -0.77
POLE-222	ENST00000545015	ALDH3B2	P48448	385 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	FXYD4	P59646	89 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	HERV-K104	P61576	105 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	RPL8	P62917	257 aa	Known RBP	10.27	□□□□□ -0.77
POLE-222	ENST00000545015	ZNF45	Q02386	682 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	NECAP1	Q8NC96	275 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	OR6Q1	Q8NGQ2	317 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	OR5H2	Q8NGV7	314 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	AP3S1	Q92572	193 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	PRR25	Q96S07	402 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	GPHA2	Q96T91	129 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	ELOVL1	Q9BW60	279 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	MRPS26	Q9BYN8	205 aa	Known RBP	10.27	□□□□□ -0.77
POLE-222	ENST00000545015	NAA50	Q9GZZ1	169 aa	Known RBP	10.27	□□□□□ -0.77
POLE-222	ENST00000545015	SLC2A9	Q9NRM0	540 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	SIGLEC8	Q9NYZ4	499 aa		10.27	□□□□□ -0.77
POLE-222	ENST00000545015	COL7A1	Q02388	2944 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015		E7EUB6	86 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	MPPED1	O15442	326 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	IGLV1-51	P01701	117 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	NHLRC4	P0CG21	123 aa	Predicted RBP	10.26	□□□□□ -0.77
POLE-222	ENST00000545015	APELA	P0DMC3	54 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	ZNF182	P17025	639 aa	Predicted RBP	10.26	□□□□□ -0.77
POLE-222	ENST00000545015	RHOG	P84095	191 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	CD69	Q07108	199 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	OR4A47	Q6IF82	309 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	MZT2A	Q6P582	158 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	TMEM17	Q86X19	198 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	OR6F1	Q8NGZ6	308 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	OR4C12	Q96R67	309 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	SRSF8	Q9BRL6	282 aa	Known RBP	10.26	□□□□□ -0.77
POLE-222	ENST00000545015	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.26	□□□□□ -0.77
POLE-222	ENST00000545015	AKIP1	Q9NQ31	210 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.26	□□□□□ -0.77
POLE-222	ENST00000545015	COMMD9	Q9P000	198 aa		10.26	□□□□□ -0.77
POLE-222	ENST00000545015	DNAH9	Q9NYC9	4486 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.25	□□□□□ -0.77
POLE-222	ENST00000545015	CGB1	A6NKQ9	187 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	HPGDS	O60760	199 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	PGLYRP1	O75594	196 aa	Predicted RBP	10.25	□□□□□ -0.77
POLE-222	ENST00000545015	PMP2	P02689	132 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	CTRB1	P17538	263 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	HLA-G	P17693	338 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	RCVRN	P35243	200 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	HRH1	P35367	487 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	VAX1	Q5SQQ9	334 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	AADACL3	Q5VUY0	350 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	GPR107	Q5VW38	600 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	CTRB2	Q6GPI1	263 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	IL34	Q6ZMJ4	242 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	FYTTD1	Q96QD9	318 aa	Known RBP	10.25	□□□□□ -0.77
POLE-222	ENST00000545015	FXYD6	Q9H0Q3	95 aa		10.25	□□□□□ -0.77
POLE-222	ENST00000545015	SORL1	Q92673	2214 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	ANKRD34B	A5PLL1	514 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	HMX3	A6NHT5	357 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	GPR31	O00270	319 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	UPK2	O00526	184 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	S1PR2	O95136	353 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	TRBV12-3	P01733	135 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	SPN	P16150	400 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	F2R	P25116	425 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	HLA-DMA	P28067	261 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	PSMB6	P28072	239 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	UCP3	P55916	312 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	OR2B8P	P59922	312 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	ATP5G2	Q06055	141 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	TATDN3	Q17R31	274 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	THOC7	Q6I9Y2	204 aa	Known RBP	10.24	□□□□□ -0.77
POLE-222	ENST00000545015	LPCAT3	Q6P1A2	487 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	SSX9	Q7RTT3	188 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	CMTM1	Q8IZ96	169 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	OR9G4	Q8NGQ1	327 aa		10.24	□□□□□ -0.77
POLE-222	ENST00000545015	OR51H1	Q8NH63	302 aa		10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms