RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 LCN2P80188 198 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 WDYHV1Q96HA8 205 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 IFITM2Q01629 132 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD4-211ENST00000544484 ABLIM2Q6H8Q1 611 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 PGLYRP4Q96LB8 373 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 IGLV3-12A0A075B6K2 115 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 SS18L1O75177 396 aaPredicted RBP10.85□□□□□ -0.67
CHD4-211ENST00000544484 IGHV3-23P01764 117 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 A0A1B0GTI1 187 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 MAS1LP35410 378 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 PDLIM4P50479 330 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 GP6Q9HCN6 339 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 RRHO14718 337 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 SMAD7O15105 426 aaKnown RBP10.85□□□□□ -0.67
CHD4-211ENST00000544484 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
CHD4-211ENST00000544484 HERVK_113P61574 105 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 DNM1P46Q6ZS02 220 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 NABP2Q9BQ15 211 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 LOC285556D6RIA3 1793 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 A0A1W2PS18 150 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
CHD4-211ENST00000544484 RELBQ01201 579 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 C1QTNF5Q9BXJ0 243 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 OR51M1Q9H341 326 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.84□□□□□ -0.67
CHD4-211ENST00000544484 J3QW42 95 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 ZCCHC24Q8N2G6 241 aaKnown RBP10.84□□□□□ -0.67
CHD4-211ENST00000544484 OR51G1Q8NGK1 321 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 SMIM8Q96KF7 97 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
CHD4-211ENST00000544484 MSGN1A6NI15 193 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 CA2P00918 260 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 LHX2P50458 406 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 OR4C46A6NHA9 309 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 C17orf98A8MV24 154 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 TFF1P04155 84 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 FAM57AQ8TBR7 257 aa10.84□□□□□ -0.67
CHD4-211ENST00000544484 TGIF2-C20orf24A0A0A6YYL0 155 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 MPTX1A8MV57 137 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 M0R143 59 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 DLX1P56177 255 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 ZNF273Q14593 569 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 C2orf68Q2NKX9 166 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 NYNRINQ9P2P1 1898 aaKnown RBP10.83□□□□□ -0.68
CHD4-211ENST00000544484 IL4P05112 153 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 NR2C2APQ86WQ0 139 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 STPG3Q8N7X2 389 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 C5orf52A6NGY3 159 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 TM2D1Q9BX74 207 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 PINLYPA6NC86 204 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 NPIPB11E5RHQ5 1161 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 CKS2P33552 79 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 ZP1P60852 638 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 KIAA1644Q3SXP7 199 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 ZNF362Q5T0B9 420 aaPredicted RBP10.83□□□□□ -0.68
CHD4-211ENST00000544484 NMUP48645 174 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 NEU1Q99519 415 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 HSPB9Q9BQS6 159 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 NEUROG3Q9Y4Z2 214 aa10.83□□□□□ -0.68
CHD4-211ENST00000544484 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 IFITM10A6NMD0 228 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 PRR32B1ATL7 298 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 ZNF502Q8TBZ5 544 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
CHD4-211ENST00000544484 LTBP1Q14766 1721 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 ZNF146Q15072 292 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 DOCK4Q8N1I0 1966 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 ZNF646O15015 1829 aaPredicted RBP10.82□□□□□ -0.68
CHD4-211ENST00000544484 DANCRP0C864 163 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 MRPL13Q9BYD1 178 aaKnown RBP10.82□□□□□ -0.68
CHD4-211ENST00000544484 FAM106AQ4KMX7 169 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 RAXQ9Y2V3 346 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 FOXH1O75593 365 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 KLF7O75840 302 aaPredicted RBP10.82□□□□□ -0.68
CHD4-211ENST00000544484 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
CHD4-211ENST00000544484 LOC102723996A0A087X1L8 192 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 ZNF207O43670 478 aaKnown RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 CENPVQ7Z7K6 275 aaPredicted RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 PARLQ9H300 379 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 ZFP36L1Q07352 338 aaKnown RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 SSBP3Q9BWW4 388 aaPredicted RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 C1QTNF12Q5T7M4 302 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 TXNDC17Q9BRA2 123 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 CDKN1AP38936 164 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 NHLRC3Q5JS37 347 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 DDB2Q92466 427 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 SPSB4Q96A44 273 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms