RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG8-202ENST00000543872 ARL2-SNX15V9GYD0 113 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 LRP4O75096 1905 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 BMPR1BO00238 502 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 TIAF1O95411 115 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 EAF1Q96JC9 268 aaPredicted RBP10.6□□□□□ -0.71
SMG8-202ENST00000543872 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 LRP5LA4QPB2 252 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 M0R2Z0 102 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
SMG8-202ENST00000543872 SPATA31B1PQ5VZV4 182 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 PQLC2Q6ZP29 291 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
SMG8-202ENST00000543872 A6NJY4 79 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
SMG8-202ENST00000543872 TNXAQ16473 311 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 RNASEKQ6P5S7 137 aaKnown RBP10.59□□□□□ -0.71
SMG8-202ENST00000543872 YRDCQ86U90 279 aaKnown RBP10.59□□□□□ -0.71
SMG8-202ENST00000543872 PLXDC1Q8IUK5 500 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 GCM1Q9NP62 436 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 CLEC1BQ9P126 229 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 ZNF391Q9UJN7 358 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 IGHV1OR21-1A0A087WYE8 117 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 IGLV3-32A0A0A0MS00 114 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 A0A1W2PPC4 97 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 C17orf98A8MV24 154 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 FOXH1O75593 365 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 RHBDL1O75783 438 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 ACTL6BO94805 426 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 NEUROG1Q92886 237 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 CDC42EP3Q9UKI2 254 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 V9GYV3 84 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 LGALS7P47929 136 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 PMCHL1Q16048 86 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 TRIM61Q5EBN2 209 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 OR10J3Q5JRS4 329 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 DCAF12Q5T6F0 453 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 WDR74Q6RFH5 385 aaPredicted RBP10.59□□□□□ -0.71
SMG8-202ENST00000543872 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
SMG8-202ENST00000543872 CXCL13O43927 109 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CXorf1O96002 111 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 NGFP01138 241 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 APCSP02743 223 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 GNG4P50150 75 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 OR5B3Q8NH48 314 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CEP290O15078 2479 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CCL3P10147 92 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CRYBB3P26998 211 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CA7P43166 264 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CEACAM21Q3KPI0 293 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 EBLN2Q6P2I7 272 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 MUC15Q8N387 334 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 FADS6Q8N9I5 356 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 OR1N2Q8NGR9 330 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 SSBP3Q9BWW4 388 aaPredicted RBP10.58□□□□□ -0.72
SMG8-202ENST00000543872 WDR83OSQ9Y284 106 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 DOCK10Q96BY6 2186 aa10.58□□□□□ -0.72
SMG8-202ENST00000543872 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TAX1BP3O14907 124 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 USF1P22415 310 aaPredicted RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 GCHFRP30047 84 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TRIP6Q15654 476 aaKnown RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TMEM240Q5SV17 173 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 OR4P4Q8NGL7 312 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 OR2Y1Q8NGV0 311 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TMEM186Q96B77 213 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 CHCHD2Q9Y6H1 151 aaPredicted RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 HELTA6NFD8 242 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 OR7C2O60412 319 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 ZIC3O60481 467 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 STAG3L2P0CL84 134 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 STAG3L3P0CL85 134 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 GPR6P46095 362 aaPredicted RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 PCBD1P61457 104 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 PNKDQ8N490 385 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 NHLRC2Q8NBF2 726 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 CPT1CQ8TCG5 803 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 AKIRIN1Q9H9L7 192 aaPredicted RBP10.57□□□□□ -0.72
SMG8-202ENST00000543872 GP6Q9HCN6 339 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 H0Y8G0 127 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 DUX1O43812 170 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 CGAP01215 116 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 MT-ND6P03923 174 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 CX3CL1P78423 397 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 RBPJQ06330 500 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 Q6ZS52 159 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 KIR3DL3Q8N743 410 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 Q8N7P7 452 aa10.57□□□□□ -0.72
SMG8-202ENST00000543872 TSTD1Q8NFU3 115 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms