RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 Q8TCH9 128 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 RPUSD4Q96CM3 377 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 R3HDM4Q96D70 268 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 YPEL2Q96QA6 119 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OR4F4Q96R69 305 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TRIB1Q96RU8 372 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 NCOR1P1Q9H4R4 102 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PLSCR4Q9NRQ2 329 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 JPT1Q9UK76 154 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 WASF3Q9UPY6 502 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PSG11Q9UQ72 335 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 GAB2Q9UQC2 676 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 KIAA2026Q5HYC2 2103 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 IGKV1D-17A0A075B6S4 117 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 IGHV2OR16-5A0A0B4J2B6 119 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 IGHV1-18A0A0C4DH31 117 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SRRM5B3KS81 715 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 F2RL2O00254 374 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 DVL1O14640 695 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ITGB1BP1O14713 200 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 HMGB3O15347 200 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SPINT2O43291 252 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PDE6DO43924 150 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TIMM8AO60220 97 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MPDU1O75352 247 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 HPRT1P00492 218 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CGAP01215 116 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 AMBPP02760 352 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CGB3P0DN86 165 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CGB7P0DN87 165 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 FABP4P15090 132 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 EGR1P18146 543 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CD82P27701 267 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CD1BP29016 333 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PRDX2P32119 198 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OPRK1P41145 380 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 LOXL3P58215 753 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM3BP58499 235 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 LINC00205P59089 165 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SPCS3P61009 180 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 LCN2P80188 198 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TLE1Q04724 770 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MZT1Q08AG7 82 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 JOSD1Q15040 202 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MORN2Q502X0 79 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ACTL10Q5JWF8 245 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 LINC00469Q8N7U9 141 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 OR1P1Q8NH06 330 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM170AQ8WVE7 144 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 DDB2Q92466 427 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ACY3Q96HD9 319 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MEGF10Q96KG7 1140 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SNX22Q96L94 193 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 C16orf92Q96LL3 132 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PACRGQ96M98 296 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 PFDN5Q99471 154 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 DCTN5Q9BTE1 182 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 SCNM1Q9BWG6 230 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 MSL2Q9HCI7 577 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 X6R8D5 127 aa4.3□□□□□ -1.72
ATPAF1-212ENST00000542495 GTF3C1Q12789 2109 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 IGHV3-43A0A0B4J1X8 118 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 PCNX2A6NKB5 2137 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 C11orf94C9JXX5 98 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 PPP5D1E7EU14 171 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 F6UZH7 168 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 MGST3O14880 152 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 TNFSF13O75888 250 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 IFNA10P01566 189 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 IGHV3-43DP0DP04 118 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 GCH1P30793 250 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 GPX4P36969 197 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 GPR12P47775 334 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 FABP6P51161 128 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 PKIAP61925 76 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 GNB1P62873 340 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 RPP30P78346 268 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 GAMTQ14353 236 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 HNF4GQ14541 408 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 RTP5Q14D33 572 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 P2RY6Q15077 328 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 SPINK9Q5DT21 86 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 CT83Q5H943 113 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM180AQ6UWF9 173 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM144Q7Z5S9 345 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 LINC01551Q86U37 167 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 CNEP1R1Q8N9A8 125 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 DEFB124Q8NES8 71 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 OR2T10Q8NGZ9 312 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms