RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 OR13C5Q8NGS8 318 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 OR10K1Q8NGX5 313 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 NEK7Q8TDX7 302 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 C15orf40Q8WUR7 153 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 KCTD7Q96MP8 289 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 MGLLQ99685 303 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TMED9Q9BVK6 235 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 CST11Q9H112 138 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 C16orf95Q9H693 158 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ZFP57Q9NU63 452 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 NDUFB11Q9NX14 153 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 RDH8Q9NYR8 311 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 DPM3Q9P2X0 92 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 AMMECR1Q9Y4X0 333 aaPredicted RBP4.29□□□□□ -1.72
CPSF7-220ENST00000541963 NUBP2Q9Y5Y2 271 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TRAV8-7A0A075B6U6 113 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LOC100506127A0A0U1RQW1 187 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 MEX3AA1L020 520 aaKnown RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 ODF3BA8MYP8 253 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OOSP1A8MZH6 123 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 GEMIN2O14893 280 aaKnown RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PIN1P1O15428 100 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 CIDEAO60543 219 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 CA11O75493 328 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 CRTAPO75718 401 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 FUT3P21217 361 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 MDKP21741 143 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 NFYBP25208 207 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 CD34P28906 385 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 FGF9P31371 208 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 GLP1RP43220 463 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 KIR2DS4P43632 304 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 MAP2K4P45985 399 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 VEGFCP49767 419 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 DYNLT3P51808 116 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 AP3S2P59780 193 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PITPNAQ00169 270 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 DHODHQ02127 395 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PAX5Q02548 391 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 FGL1Q08830 312 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LY6EQ16553 131 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PIGYQ3MUY2 71 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PYDC2Q56P42 97 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PRAMEF5Q5TYX0 476 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LIPKQ5VXJ0 399 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LHFPL4Q7Z7J7 247 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 SNX29P2Q8IUI4 249 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OR4C13Q8NGP0 309 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OR9G1Q8NH87 305 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OR2T6Q8NHC8 308 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 KCNG3Q8TAE7 436 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 COQ2Q96H96 371 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 DIRAS2Q96HU8 199 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 UHRF2Q96PU4 802 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 NEDD4LQ96PU5 975 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 OR5M11Q96RB7 305 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 SELENOIQ9C0D9 397 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 MMP28Q9H239 520 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 Q9H8V8 135 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 PLSCR3Q9NRY6 295 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 CALYQ9NYX4 217 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 IDI2-AS1Q9NZ38 188 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 KCNIP1Q9NZI2 227 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 TRAPPC2LQ9UL33 140 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LSM2Q9Y333 95 aaKnown RBP4.28□□□□□ -1.72
CPSF7-220ENST00000541963 HILPDAQ9Y5L2 63 aa4.28□□□□□ -1.72
CPSF7-220ENST00000541963 LINC00854A0A1B0GVQ3 168 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 NAP1L6A6NFF2 107 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 C5orf52A6NGY3 159 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 AIPO00170 330 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 BMPR1BO00238 502 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 SULT1C2O00338 296 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 PDCD5O14737 125 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MMP23AO75900 390 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MT-ND4P03905 459 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 UCHL1P09936 223 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 CGB3P0DN86 165 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 CGB7P0DN87 165 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 MGMTP16455 207 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 S100PP25815 95 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 IL3RAP26951 378 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 HTR2CP28335 458 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 SLC6A1P30531 599 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 POLR2GP62487 172 aaKnown RBP eCLIP4.27□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF79Q15937 498 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 C17orf58Q2M2W7 97 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 HLA-DRB5Q30154 266 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 TMEM30BQ3MIR4 351 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 CDNFQ49AH0 187 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
CPSF7-220ENST00000541963 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 RAB12Q6IQ22 244 aa4.27□□□□□ -1.73
CPSF7-220ENST00000541963 TMEM182Q6ZP80 229 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms